Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55584.1 | CBL55585.1 | PFREUD_00810 | PFREUD_00820 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | Two-component response regulator. | 0.997 |
| CBL55584.1 | CBL55586.1 | PFREUD_00810 | PFREUD_00830 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | 0.777 |
| CBL55584.1 | CBL55588.1 | PFREUD_00810 | PFREUD_00850 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | Hypothetical membrane protein. | 0.605 |
| CBL55584.1 | argF | PFREUD_00810 | PFREUD_00860 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.462 |
| CBL55584.1 | mug | PFREUD_00810 | PFREUD_00870 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | G/U mismatch-specific DNA glycosylase; Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. Required for DNA damage lesion repair in stationary-phase cells. | 0.426 |
| CBL55584.1 | ptpA | PFREUD_00810 | PFREUD_00840 | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | Low molecular weight protein-tyrosine-phosphatase (protein-tyrosine-phosphatase); Protein tyrosine phosphate + H2O <=> Protein tyrosine + Orthophosphate; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.642 |
| CBL55585.1 | CBL55584.1 | PFREUD_00820 | PFREUD_00810 | Two-component response regulator. | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | 0.997 |
| CBL55585.1 | CBL55586.1 | PFREUD_00820 | PFREUD_00830 | Two-component response regulator. | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | 0.800 |
| CBL55585.1 | CBL55588.1 | PFREUD_00820 | PFREUD_00850 | Two-component response regulator. | Hypothetical membrane protein. | 0.651 |
| CBL55585.1 | argF | PFREUD_00820 | PFREUD_00860 | Two-component response regulator. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.470 |
| CBL55585.1 | mug | PFREUD_00820 | PFREUD_00870 | Two-component response regulator. | G/U mismatch-specific DNA glycosylase; Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. Required for DNA damage lesion repair in stationary-phase cells. | 0.425 |
| CBL55585.1 | ptpA | PFREUD_00820 | PFREUD_00840 | Two-component response regulator. | Low molecular weight protein-tyrosine-phosphatase (protein-tyrosine-phosphatase); Protein tyrosine phosphate + H2O <=> Protein tyrosine + Orthophosphate; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.658 |
| CBL55586.1 | CBL55584.1 | PFREUD_00830 | PFREUD_00810 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | 0.777 |
| CBL55586.1 | CBL55585.1 | PFREUD_00830 | PFREUD_00820 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | Two-component response regulator. | 0.800 |
| CBL55586.1 | CBL55588.1 | PFREUD_00830 | PFREUD_00850 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | Hypothetical membrane protein. | 0.614 |
| CBL55586.1 | argF | PFREUD_00830 | PFREUD_00860 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline; Belongs to the aspartate/ornithine carbamoyltransferase superfamily. OTCase family. | 0.435 |
| CBL55586.1 | mug | PFREUD_00830 | PFREUD_00870 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | G/U mismatch-specific DNA glycosylase; Excises ethenocytosine and uracil, which can arise by alkylation or deamination of cytosine, respectively, from the corresponding mispairs with guanine in ds-DNA. It is capable of hydrolyzing the carbon-nitrogen bond between the sugar-phosphate backbone of the DNA and the mispaired base. Required for DNA damage lesion repair in stationary-phase cells. | 0.425 |
| CBL55586.1 | ptpA | PFREUD_00830 | PFREUD_00840 | Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. | Low molecular weight protein-tyrosine-phosphatase (protein-tyrosine-phosphatase); Protein tyrosine phosphate + H2O <=> Protein tyrosine + Orthophosphate; Belongs to the low molecular weight phosphotyrosine protein phosphatase family. | 0.635 |
| CBL55588.1 | CBL55584.1 | PFREUD_00850 | PFREUD_00810 | Hypothetical membrane protein. | Sensor protein, ATPase-like:Histidine kinase; ATP + protein L-histidine = ADP + protein N-phospho-L-histidine. | 0.605 |
| CBL55588.1 | CBL55585.1 | PFREUD_00850 | PFREUD_00820 | Hypothetical membrane protein. | Two-component response regulator. | 0.651 |
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