Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55601.1 | CBL55605.1 | PFREUD_00970 | PFREUD_01010 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 6 Protein of unknown function, without similarity to other proteins. | 0.553 |
| CBL55601.1 | CBL55909.1 | PFREUD_00970 | PFREUD_03760 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. | 0.639 |
| CBL55601.1 | CBL55910.1 | PFREUD_00970 | PFREUD_03770 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Transcriptional regulator ArsR. | 0.409 |
| CBL55601.1 | aatA | PFREUD_00970 | PFREUD_00990 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.773 |
| CBL55601.1 | hflC1 | PFREUD_00970 | PFREUD_00960 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Gluconokinase; ATP + D-Gluconic acid <=> ADP + 6-Phospho-D-gluconate. | 0.680 |
| CBL55601.1 | int-10 | PFREUD_00970 | PFREUD_24290 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Integrase, catalytic region. | 0.406 |
| CBL55601.1 | norB | PFREUD_00970 | PFREUD_00980 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.954 |
| CBL55601.1 | tnpC | PFREUD_00970 | PFREUD_24280 | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | Transposase IS3/IS911. | 0.406 |
| CBL55605.1 | CBL55601.1 | PFREUD_01010 | PFREUD_00970 | 6 Protein of unknown function, without similarity to other proteins. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.553 |
| CBL55605.1 | aatA | PFREUD_01010 | PFREUD_00990 | 6 Protein of unknown function, without similarity to other proteins. | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 0.553 |
| CBL55605.1 | int-10 | PFREUD_01010 | PFREUD_24290 | 6 Protein of unknown function, without similarity to other proteins. | Integrase, catalytic region. | 0.549 |
| CBL55605.1 | norB | PFREUD_01010 | PFREUD_00980 | 6 Protein of unknown function, without similarity to other proteins. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.553 |
| CBL55605.1 | tnpC | PFREUD_01010 | PFREUD_24280 | 6 Protein of unknown function, without similarity to other proteins. | Transposase IS3/IS911. | 0.549 |
| CBL55909.1 | CBL55601.1 | PFREUD_03760 | PFREUD_00970 | Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.639 |
| CBL55909.1 | CBL55910.1 | PFREUD_03760 | PFREUD_03770 | Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. | Transcriptional regulator ArsR. | 0.948 |
| CBL55909.1 | norB | PFREUD_03760 | PFREUD_00980 | Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. | Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O. | 0.605 |
| CBL55910.1 | CBL55601.1 | PFREUD_03770 | PFREUD_00970 | Transcriptional regulator ArsR. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.409 |
| CBL55910.1 | CBL55909.1 | PFREUD_03770 | PFREUD_03760 | Transcriptional regulator ArsR. | Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. | 0.948 |
| aatA | CBL55601.1 | PFREUD_00990 | PFREUD_00970 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM. | 0.773 |
| aatA | CBL55605.1 | PFREUD_00990 | PFREUD_01010 | Leucyl/phenylalanyl-tRNA-protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine. | 6 Protein of unknown function, without similarity to other proteins. | 0.553 |
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