STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pkaASerine/threonine protein kinase; ATP + Protein <=> ADP + Phosphoprotein. (728 aa)    
Predicted Functional Partners:
pf456
5.2 Protein of unknown function similar to proteins from other organisms.
 
 
 0.867
CBL56754.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
 
 
 
 0.829
pkn
Serine/threonine protein kinase; ATP + Protein <=> ADP + Phosphoprotein.
  
     0.774
CBL56504.1
PP2Cc, Serine/threonine phosphatases.
 
 
 0.771
CBL57450.1
Forkhead-associated protein; Involved in signal transduction mechanisms.
 
 
 
 0.657
CBL57449.1
Forkhead-associated protein.
 
 
 
 0.559
CBL57067.1
6 Protein of unknown function, without similarity to other proteins.
 
 
0.439
pknB
Serine/threonine protein kinase; ATP + Protein <=> ADP + Phosphoprotein.
 
 
0.438
CBL55620.1
Secreted transglycosydase.
  
    0.415
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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