STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
vprSubtilases are a family of serine proteases. (501 aa)    
Predicted Functional Partners:
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
    0.514
pf774
Putative carboxylic ester hydrolase.
   
 
 0.473
CBL57585.1
Regulator of chromosome condensation.
   
 
 0.473
CBL56503.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.464
CBL55623.1
6 Protein of unknown function, without similarity to other proteins.
       0.457
CBL55942.1
Hypothetical protein; No signal peptide (signalP) and 2 TM domains.
  
 
 0.421
CBL56010.1
6 Protein of unknown function, without similarity to other proteins.
  
 
 0.421
CBL57259.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
 
 0.421
CBL57336.1
S-layer protein.
  
 
 0.421
CBL57698.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
 
 0.421
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
Server load: low (30%) [HD]