Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55649.1 | PPA1976 | PFREUD_01310 | PFREUD_01300 | 5.2 Protein of unknown function similar to proteins from other organisms. | Para-aminobenzoate synthase. | 0.800 |
| CBL56181.1 | PPA1976 | PFREUD_06500 | PFREUD_01300 | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | Para-aminobenzoate synthase. | 0.832 |
| CBL56181.1 | aroF | PFREUD_06500 | PFREUD_11530 | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.973 |
| CBL56181.1 | pabA | PFREUD_06500 | PFREUD_02250 | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; Chorismate + NH3 <=> Anthranilate + Pyruvate + H2O Chorismate + L-Glutamine <=> Anthranilate + Pyruvate + L-Glutamate. | 0.859 |
| CBL56181.1 | trpE | PFREUD_06500 | PFREUD_11910 | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.916 |
| PPA1976 | CBL55649.1 | PFREUD_01300 | PFREUD_01310 | Para-aminobenzoate synthase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.800 |
| PPA1976 | CBL56181.1 | PFREUD_01300 | PFREUD_06500 | Para-aminobenzoate synthase. | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | 0.832 |
| PPA1976 | aroF | PFREUD_01300 | PFREUD_11530 | Para-aminobenzoate synthase. | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | 0.934 |
| PPA1976 | pabA | PFREUD_01300 | PFREUD_02250 | Para-aminobenzoate synthase. | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; Chorismate + NH3 <=> Anthranilate + Pyruvate + H2O Chorismate + L-Glutamine <=> Anthranilate + Pyruvate + L-Glutamate. | 0.999 |
| PPA1976 | pabC | PFREUD_01300 | PFREUD_05690 | Para-aminobenzoate synthase. | Branched-chain amino acid aminotransferase/aminodeoxychorismate lyase. | 0.911 |
| PPA1976 | trpA | PFREUD_01300 | PFREUD_11880 | Para-aminobenzoate synthase. | Tryptophan synthase alpha chain (TrpA); The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.945 |
| PPA1976 | trpB | PFREUD_01300 | PFREUD_11890 | Para-aminobenzoate synthase. | Tryptophan synthase beta chain (TrpB); The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.930 |
| PPA1976 | trpC | PFREUD_01300 | PFREUD_11900 | Para-aminobenzoate synthase. | Indole-3-glycerol phosphate synthase (TrpC); 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate = 1-C-(3-indolyl)-glycerol 3-phosphate + CO2 + H2O; Belongs to the TrpC family. | 0.984 |
| PPA1976 | trpD | PFREUD_01300 | PFREUD_15830 | Para-aminobenzoate synthase. | Anthranilate phosphoribosyltransferase; Catalyzes the transfer of the phosphoribosyl group of 5- phosphorylribose-1-pyrophosphate (PRPP) to anthranilate to yield N-(5'- phosphoribosyl)-anthranilate (PRA). | 0.987 |
| PPA1976 | trpE | PFREUD_01300 | PFREUD_11910 | Para-aminobenzoate synthase. | Anthranilate synthase component I; Part of a heterotetrameric complex that catalyzes the two- step biosynthesis of anthranilate, an intermediate in the biosynthesis of L-tryptophan. In the first step, the glutamine-binding beta subunit (TrpG) of anthranilate synthase (AS) provides the glutamine amidotransferase activity which generates ammonia as a substrate that, along with chorismate, is used in the second step, catalyzed by the large alpha subunit of AS (TrpE) to produce anthranilate. In the absence of TrpG, TrpE can synthesize anthranilate directly from chorismate and high concentr [...] | 0.847 |
| aroF | CBL56181.1 | PFREUD_11530 | PFREUD_06500 | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Chorismate mutase EC:5.4.99.5 catalyses the conversion of chorismate to prephenate in the pathway of tyrosine and phenylalanine biosynthesis. This enzyme is negatively regulated by tyrosine, tryptophan and phenylalanine. | 0.973 |
| aroF | PPA1976 | PFREUD_11530 | PFREUD_01300 | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Para-aminobenzoate synthase. | 0.934 |
| aroF | pabA | PFREUD_11530 | PFREUD_02250 | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; Chorismate + NH3 <=> Anthranilate + Pyruvate + H2O Chorismate + L-Glutamine <=> Anthranilate + Pyruvate + L-Glutamate. | 0.898 |
| aroF | trpA | PFREUD_11530 | PFREUD_11880 | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase alpha chain (TrpA); The alpha subunit is responsible for the aldol cleavage of indoleglycerol phosphate to indole and glyceraldehyde 3-phosphate. Belongs to the TrpA family. | 0.884 |
| aroF | trpB | PFREUD_11530 | PFREUD_11890 | Chorismate synthase (5-enolpyruvylshikimate-3-phosphate phospholyase); Catalyzes the anti-1,4-elimination of the C-3 phosphate and the C-6 proR hydrogen from 5-enolpyruvylshikimate-3-phosphate (EPSP) to yield chorismate, which is the branch point compound that serves as the starting substrate for the three terminal pathways of aromatic amino acid biosynthesis. This reaction introduces a second double bond into the aromatic ring system. | Tryptophan synthase beta chain (TrpB); The beta subunit is responsible for the synthesis of L- tryptophan from indole and L-serine. | 0.633 |
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