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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ugpQ1Glycerophosphoryl diester phosphodiesterase; Glycerophosphodiester + H2O <=> Alcohol + sn-Glycerol 3-phosphate. (239 aa)    
Predicted Functional Partners:
glpQ
Glycerophosphoryl diester phosphodiesterase; Glycerophosphodiester + H2O <=> Alcohol + sn-Glycerol 3-phosphate.
  
  
 
0.927
ugpQ2
Glycerophosphoryl diester phosphodiesterase; Glycerophosphodiester + H2O <=> Alcohol + sn-Glycerol 3-phosphate.
  
  
 
0.924
CBL55671.1
Short-chain alcohol dehydrogenase of unknown specificity; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
       0.777
glpA
Anaerobic glycerol-3-phosphate dehydrogenase subunit A; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
 
 0.685
glpK
Glycerol kinase (ATP:glycerol 3-phosphotransferase) (Glycerokinase) (GK); Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
 
  
 0.640
glpB
Anaerobic glycerol-3-phosphate dehydrogenase subunit B; Conversion of glycerol 3-phosphate to dihydroxyacetone. Uses fumarate or nitrate as electron acceptor. sn-glycerol 3-phosphate + acceptor = glycerone phosphate + reduced acceptor.
  
 
  0.591
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C; Composed of a catalytic glpA/B dimer and of glpC. Electron transfer protein; may also function as the membrane anchor for the glpAB dimer.
   
 
  0.520
CBL55669.1
6 Protein of unknown function, without similarity to other proteins.
       0.499
vanZ
VanZ; Confers low-level resistance to the glycopeptide antibiotic teicoplanin (Te)Arthur M, Depardieu F, Molinas C, Reynolds P, Courvalin P; , Gene 1995;154:87-92.: The vanZ gene of Tn1546 from Enterococcus faecium BM4147 confers resistance to teicoplanin.
       0.499
glpF
Glycerol uptake facilitator protein; FUNCTION: Glycerol enters the cell via the glycerol diffusion facilitator protein. This membrane protein facilitates the movement of glycerol across the cytoplasmic membrane (By similarity). # DOMAIN: Aquaporins contain two tandem repeats each containing three membrane-spanning domains and a pore-forming loop with the signature motif Asn-Pro-Ala (NPA); Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.490
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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