Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55686.1 | CBL55915.1 | PFREUD_01710 | PFREUD_03820 | Exonuclease. | 6 Protein of unknown function, without similarity to other proteins. | 0.947 |
| CBL55686.1 | CoA | PFREUD_01710 | PFREUD_01700 | Exonuclease. | Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway. | 0.532 |
| CBL55686.1 | dnaE1 | PFREUD_01710 | PFREUD_11830 | Exonuclease. | DNA polymerase III alpha subunit. | 0.949 |
| CBL55686.1 | dnaE2 | PFREUD_01710 | PFREUD_15640 | Exonuclease. | DNA polymerase III alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.512 |
| CBL55686.1 | dnaN | PFREUD_01710 | PFREUD_00080 | Exonuclease. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.963 |
| CBL55686.1 | dnaX | PFREUD_01710 | PFREUD_20530 | Exonuclease. | DNA polymerase III, delta prime subunit; Deoxynucleoside triphosphate + DNA <=> Pyrophosphate + DNA. | 0.947 |
| CBL55686.1 | fkbP | PFREUD_01710 | PFREUD_01690 | Exonuclease. | FK506-binding protein (peptidyl-prolyl cis-trans isomerase). | 0.542 |
| CBL55686.1 | holA | PFREUD_01710 | PFREUD_08660 | Exonuclease. | DNA polymerase III, delta subunit. | 0.942 |
| CBL55686.1 | polA | PFREUD_01710 | PFREUD_15360 | Exonuclease. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.618 |
| CBL55686.1 | rpmD | PFREUD_01710 | PFREUD_05890 | Exonuclease. | 50S ribosomal protein L30. | 0.597 |
| CBL55915.1 | CBL55686.1 | PFREUD_03820 | PFREUD_01710 | 6 Protein of unknown function, without similarity to other proteins. | Exonuclease. | 0.947 |
| CBL55915.1 | dnaE1 | PFREUD_03820 | PFREUD_11830 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III alpha subunit. | 0.969 |
| CBL55915.1 | dnaE2 | PFREUD_03820 | PFREUD_15640 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III alpha subunit; DNA polymerase involved in damage-induced mutagenesis and translesion synthesis (TLS). It is not the major replicative DNA polymerase. Deoxynucleoside triphosphate + DNA(n) = diphosphate + DNA(n+1); Belongs to the DNA polymerase type-C family. DnaE2 subfamily. | 0.680 |
| CBL55915.1 | dnaN | PFREUD_03820 | PFREUD_00080 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III, beta chain; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of r [...] | 0.993 |
| CBL55915.1 | dnaX | PFREUD_03820 | PFREUD_20530 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III, delta prime subunit; Deoxynucleoside triphosphate + DNA <=> Pyrophosphate + DNA. | 0.924 |
| CBL55915.1 | holA | PFREUD_03820 | PFREUD_08660 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III, delta subunit. | 0.984 |
| CBL55915.1 | polA | PFREUD_03820 | PFREUD_15360 | 6 Protein of unknown function, without similarity to other proteins. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.455 |
| CoA | CBL55686.1 | PFREUD_01700 | PFREUD_01710 | Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway. | Exonuclease. | 0.532 |
| CoA | fkbP | PFREUD_01700 | PFREUD_01690 | Pantothenate kinase (PanK) catalyzes the phosphorylation of pantothenic acid to form 4-phosphopantothenic, which is the first of five steps in coenzyme A (CoA) biosynthetic pathway. | FK506-binding protein (peptidyl-prolyl cis-trans isomerase). | 0.773 |
| dnaE1 | CBL55686.1 | PFREUD_11830 | PFREUD_01710 | DNA polymerase III alpha subunit. | Exonuclease. | 0.949 |
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