Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55697.1 | CBL56065.1 | PFREUD_01830 | PFREUD_05340 | 6 Protein of unknown function, without similarity to other proteins. | Thiamine pyrophosphate (TPP family). | 0.647 |
| CBL55697.1 | CBL56066.1 | PFREUD_01830 | PFREUD_05350 | 6 Protein of unknown function, without similarity to other proteins. | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.919 |
| CBL55697.1 | nifJ1 | PFREUD_01830 | PFREUD_01840 | 6 Protein of unknown function, without similarity to other proteins. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.999 |
| CBL55697.1 | nifJ2 | PFREUD_01830 | PFREUD_07070 | 6 Protein of unknown function, without similarity to other proteins. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.997 |
| CBL55697.1 | nuoI | PFREUD_01830 | PFREUD_05240 | 6 Protein of unknown function, without similarity to other proteins. | NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.569 |
| CBL56065.1 | CBL55697.1 | PFREUD_05340 | PFREUD_01830 | Thiamine pyrophosphate (TPP family). | 6 Protein of unknown function, without similarity to other proteins. | 0.647 |
| CBL56065.1 | CBL56066.1 | PFREUD_05340 | PFREUD_05350 | Thiamine pyrophosphate (TPP family). | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.999 |
| CBL56065.1 | ldh1 | PFREUD_05340 | PFREUD_11570 | Thiamine pyrophosphate (TPP family). | L-Lactate dehydrogenase; (S)-Lactate + NAD+ <=> Pyruvate + NADH + H+; Belongs to the LDH/MDH superfamily. | 0.917 |
| CBL56065.1 | ldh2 | PFREUD_05340 | PFREUD_12840 | Thiamine pyrophosphate (TPP family). | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.917 |
| CBL56065.1 | nifJ1 | PFREUD_05340 | PFREUD_01840 | Thiamine pyrophosphate (TPP family). | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.999 |
| CBL56065.1 | nifJ2 | PFREUD_05340 | PFREUD_07070 | Thiamine pyrophosphate (TPP family). | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.999 |
| CBL56065.1 | nuoI | PFREUD_05340 | PFREUD_05240 | Thiamine pyrophosphate (TPP family). | NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.400 |
| CBL56065.1 | pta | PFREUD_05340 | PFREUD_00700 | Thiamine pyrophosphate (TPP family). | Acetyl-CoA + Orthophosphate <=> CoA + Acetyl phosphate / Propanoyl-CoA + Orthophosphate <=> Propanoyl phosphate + CoA. | 0.920 |
| CBL56066.1 | CBL55697.1 | PFREUD_05350 | PFREUD_01830 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 6 Protein of unknown function, without similarity to other proteins. | 0.919 |
| CBL56066.1 | CBL56065.1 | PFREUD_05350 | PFREUD_05340 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Thiamine pyrophosphate (TPP family). | 0.999 |
| CBL56066.1 | ldh1 | PFREUD_05350 | PFREUD_11570 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | L-Lactate dehydrogenase; (S)-Lactate + NAD+ <=> Pyruvate + NADH + H+; Belongs to the LDH/MDH superfamily. | 0.956 |
| CBL56066.1 | ldh2 | PFREUD_05350 | PFREUD_12840 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. | 0.956 |
| CBL56066.1 | nifJ1 | PFREUD_05350 | PFREUD_01840 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.999 |
| CBL56066.1 | nifJ2 | PFREUD_05350 | PFREUD_07070 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.999 |
| CBL56066.1 | nuoI | PFREUD_05350 | PFREUD_05240 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | NADH-quinone oxidoreductase subunit I (NADH dehydrogenase I subunit I) (NDH-1 subunit I); NDH-1 shuttles electrons from NADH, via FMN and iron-sulfur (Fe-S) centers, to quinones in the respiratory chain. The immediate electron acceptor for the enzyme in this species is believed to be ubiquinone. Couples the redox reaction to proton translocation (for every two electrons transferred, four hydrogen ions are translocated across the cytoplasmic membrane), and thus conserves the redox energy in a proton gradient. | 0.809 |
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