Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55682.1 | CBL55683.1 | PFREUD_01670 | PFREUD_01680 | Acetyltransferase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.935 |
| CBL55682.1 | CBL55722.1 | PFREUD_01670 | PFREUD_02070 | Acetyltransferase. | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | 0.499 |
| CBL55682.1 | CBL55806.1 | PFREUD_01670 | PFREUD_02840 | Acetyltransferase. | 6 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. | 0.499 |
| CBL55682.1 | CBL55985.1 | PFREUD_01670 | PFREUD_04510 | Acetyltransferase. | NADH-flavin reductase; Reduced riboflavin + NADP+ <=> Riboflavin + NADPH + H+. | 0.478 |
| CBL55683.1 | CBL55682.1 | PFREUD_01680 | PFREUD_01670 | 5.2 Protein of unknown function similar to proteins from other organisms. | Acetyltransferase. | 0.935 |
| CBL55683.1 | CBL55722.1 | PFREUD_01680 | PFREUD_02070 | 5.2 Protein of unknown function similar to proteins from other organisms. | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | 0.429 |
| CBL55683.1 | CBL55806.1 | PFREUD_01680 | PFREUD_02840 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. | 0.420 |
| CBL55683.1 | CBL55985.1 | PFREUD_01680 | PFREUD_04510 | 5.2 Protein of unknown function similar to proteins from other organisms. | NADH-flavin reductase; Reduced riboflavin + NADP+ <=> Riboflavin + NADPH + H+. | 0.429 |
| CBL55683.1 | CBL56525.1 | PFREUD_01680 | PFREUD_10000 | 5.2 Protein of unknown function similar to proteins from other organisms. | Acetyltransferase. | 0.850 |
| CBL55722.1 | CBL55682.1 | PFREUD_02070 | PFREUD_01670 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | Acetyltransferase. | 0.499 |
| CBL55722.1 | CBL55683.1 | PFREUD_02070 | PFREUD_01680 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.429 |
| CBL55722.1 | CBL55806.1 | PFREUD_02070 | PFREUD_02840 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | 6 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. | 0.405 |
| CBL55722.1 | CBL55985.1 | PFREUD_02070 | PFREUD_04510 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | NADH-flavin reductase; Reduced riboflavin + NADP+ <=> Riboflavin + NADPH + H+. | 0.561 |
| CBL55722.1 | CBL56525.1 | PFREUD_02070 | PFREUD_10000 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | Acetyltransferase. | 0.484 |
| CBL55722.1 | CBL57234.1 | PFREUD_02070 | PFREUD_17230 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | Nucleoside-diphosphate-sugar epimerases. | 0.745 |
| CBL55722.1 | araC1 | PFREUD_02070 | PFREUD_02080 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | Helix-turn-helix, AraC type. | 0.850 |
| CBL55722.1 | mar | PFREUD_02070 | PFREUD_02060 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | MarR, Transcriptional regulators. | 0.841 |
| CBL55722.1 | rpoD | PFREUD_02070 | PFREUD_02050 | NAD-dependent epimerase/dehydratase; This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. | RNA polymerase, sigma-24 subunit, ECF subfamily RpoE; Belongs to the sigma-70 factor family. ECF subfamily. | 0.464 |
| CBL55806.1 | CBL55682.1 | PFREUD_02840 | PFREUD_01670 | 6 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. | Acetyltransferase. | 0.499 |
| CBL55806.1 | CBL55683.1 | PFREUD_02840 | PFREUD_01680 | 6 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.420 |
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