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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
whiPHypothetical transmembrane protein; Involved in cell division; Belongs to the CrgA family. (95 aa)    
Predicted Functional Partners:
CBL57041.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
   
 0.822
ftsQ
Cell division protein FtsQ; Essential cell division protein.
  
 
 
 0.809
pbpA
Penicillin-binding protein.
   
 
 0.809
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
    
 
 0.784
ftsI
Cell division protein FtsI (penicillin-binding protein 2) (Peptidoglycan glycosyltransferase); Transpeptidase activity involved in the biosynthesis of septal peptidoglycan.
   
 
 0.774
CBL57922.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
   
 0.761
CBL56878.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.756
CBL56574.1
Hypothetical secreted protein.
  
     0.728
CBL57218.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.714
whiA
ABC transporter precursor; Involved in cell division and chromosome segregation.
      
 0.708
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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