Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
CBL55739.15.2 Protein of unknown function similar to proteins from other organisms. (244 aa)    
Predicted Functional Partners:
CBL56757.1
This family consists of several bacterial small basic proteins of around 100 residues in length. The function of this family is unknown.
 
    0.870
CBL56756.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.774
whiP
Hypothetical transmembrane protein; Involved in cell division; Belongs to the CrgA family.
       0.657
pabA
Glutamine amidotransferase of anthranilate synthase or para-aminobenzoate synthase; Chorismate + NH3 <=> Anthranilate + Pyruvate + H2O Chorismate + L-Glutamine <=> Anthranilate + Pyruvate + L-Glutamate.
       0.615
disA
DNA integrity scanning protein disA; Participates in a DNA-damage check-point that is active prior to asymmetric division when DNA is damaged; Belongs to the DisA family.
  
     0.552
CBL56140.1
Resuscitation-promoting factor RpfB.
  
     0.470
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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