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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL55778.1ABC transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (321 aa)    
Predicted Functional Partners:
fepC3
FepC.
 
  
 0.977
fepC1
ABC transporter, iron transport ATPase protein.
 
  
 0.892
CBL55780.1
ABC transporter, binding lipoprotein.
 
  
 0.875
CBL55779.1
ABC-type transporter, permease component; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.810
fepC2
Iron transport system substrate-binding protein ABC transporter.
 
  
 0.586
fepD
Iron ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
  
0.518
CBL56209.1
ABC transporter; Highly similar to Q411B6_KINRA from Kineococcus radiotolerans SRS30216 and COG domain.
  
    0.417
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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