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STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL55806.16 Protein of unknown function, without similarity to other proteins; Belongs to the UPF0337 (CsbD) family. (72 aa)    
Predicted Functional Partners:
dps
Starvation-inducible DNA-binding protein; Expression of DPS is induced by oxidative or nutritional stress, including metal ion starvation; Belongs to the Dps family.
  
  
 0.607
CBL55807.1
5.2 Protein of unknown function similar to proteins from other organisms.
       0.603
CBL55808.1
Hypothetical membrane protein.
       0.603
mmgA
2 Acetyl-CoA <=> CoA + Acetoacetyl-CoA and Acetyl-CoA + Butanoyl-CoA <=> CoA + 3-Oxohexanoyl-CoA; Belongs to the thiolase-like superfamily. Thiolase family.
       0.513
menE1
O-succinylbenzoate-CoA ligase; ATP + 2-Succinylbenzoate + CoA <=> AMP + Pyrophosphate + 2-Succinylbenzoyl-CoA.
       0.513
tagG2
ABC-type polysaccharide export systems.
  
    0.502
CBL55682.1
Acetyltransferase.
   
    0.499
CBL56525.1
Acetyltransferase.
   
    0.499
tagG1
ABC-type polysaccharide export systems, permease component.
  
    0.485
CBL56205.1
6 Protein of unknown function, without similarity to other proteins.
  
  
 0.453
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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