Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55794.1 | dcm | PFREUD_02720 | PFREUD_02770 | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | S-Adenosyl-L-methionine + DNA <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine and S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine. | 0.417 |
| CBL55794.1 | pf1861 | PFREUD_02720 | PFREUD_03560 | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | Putative carboxylic ester hydrolase. | 0.523 |
| dcm | CBL55794.1 | PFREUD_02770 | PFREUD_02720 | S-Adenosyl-L-methionine + DNA <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine and S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine. | NUDIX hydrolase; Belongs to the Nudix hydrolase family. | 0.417 |
| dcm | dnaG2 | PFREUD_02770 | PFREUD_21300 | S-Adenosyl-L-methionine + DNA <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine and S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine. | DNA primase. | 0.481 |
| dcm | pf1861 | PFREUD_02770 | PFREUD_03560 | S-Adenosyl-L-methionine + DNA <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine and S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine. | Putative carboxylic ester hydrolase. | 0.503 |
| dinG | dnaG2 | PFREUD_13050 | PFREUD_21300 | Probable helicase involved in DNA repair and perhaps also replication. | DNA primase. | 0.536 |
| dinG | hepA | PFREUD_13050 | PFREUD_00710 | Probable helicase involved in DNA repair and perhaps also replication. | Helicase (SNF2-related protein). | 0.849 |
| dinG | pf1861 | PFREUD_13050 | PFREUD_03560 | Probable helicase involved in DNA repair and perhaps also replication. | Putative carboxylic ester hydrolase. | 0.794 |
| dinG | polA | PFREUD_13050 | PFREUD_15360 | Probable helicase involved in DNA repair and perhaps also replication. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.914 |
| dinG | rpoA | PFREUD_13050 | PFREUD_06070 | Probable helicase involved in DNA repair and perhaps also replication. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.958 |
| dinG | rpoB | PFREUD_13050 | PFREUD_05600 | Probable helicase involved in DNA repair and perhaps also replication. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.943 |
| dinG | rpoC | PFREUD_13050 | PFREUD_05610 | Probable helicase involved in DNA repair and perhaps also replication. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.823 |
| dinG | rpoZ | PFREUD_13050 | PFREUD_11420 | Probable helicase involved in DNA repair and perhaps also replication. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.967 |
| dnaG2 | dcm | PFREUD_21300 | PFREUD_02770 | DNA primase. | S-Adenosyl-L-methionine + DNA <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine and S-Adenosyl-L-methionine + DNA cytosine <=> S-Adenosyl-L-homocysteine + DNA 5-methylcytosine. | 0.481 |
| dnaG2 | dinG | PFREUD_21300 | PFREUD_13050 | DNA primase. | Probable helicase involved in DNA repair and perhaps also replication. | 0.536 |
| dnaG2 | hepA | PFREUD_21300 | PFREUD_00710 | DNA primase. | Helicase (SNF2-related protein). | 0.441 |
| dnaG2 | pf1861 | PFREUD_21300 | PFREUD_03560 | DNA primase. | Putative carboxylic ester hydrolase. | 0.482 |
| dnaG2 | polA | PFREUD_21300 | PFREUD_15360 | DNA primase. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.898 |
| dnaG2 | rpoB | PFREUD_21300 | PFREUD_05600 | DNA primase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.545 |
| dnaG2 | rpoC | PFREUD_21300 | PFREUD_05610 | DNA primase. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.576 |
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