STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL55909.1Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus. (95 aa)    
Predicted Functional Partners:
CBL55910.1
Transcriptional regulator ArsR.
 
     0.948
CBL55911.1
Hypothetical membrane protein.
 
     0.916
aniA
Copper-containing nitrite reductase precursor (Major outer membrane protein Pan 1); Transmembrane and signal peptide (TM HMM and Signal P).
 
     0.914
CBL55601.1
Hypothetical protein; No peptide signal, 3 TM domains according to TMHMM.
  
     0.639
narJ
Nitrate reductase beta chain (fragment); # Nitrite + Acceptor <=> Nitrate + Reduced acceptor # Ferricytochrome c + Nitrite <=> Nitrate + Ferrocytochrome c Ubiquinol + Nitrate <=> Ubiquinone + Nitrite.
 
     0.626
norB
Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O.
 
     0.605
gltB
Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin.
   
    0.445
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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