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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aniACopper-containing nitrite reductase precursor (Major outer membrane protein Pan 1); Transmembrane and signal peptide (TM HMM and Signal P). (878 aa)    
Predicted Functional Partners:
CBL55911.1
Hypothetical membrane protein.
     0.976
norB
Nitric-oxide reductase subunit B (nitric-oxide reductase); Reduced acceptor + 2 Nitric oxide <=> Nitrous oxide + Acceptor + H2O / Nitric oxide + NADH + H+ <=> Nitrous oxide + NAD+ + H2O.
 
  
 0.951
CBL55909.1
Hemerythrin HHE cation binding region; Hemerythrin is an oligomeric protein responsible for oxygen (O2) transportation. hemerythrin was discovered in methanotrophic bacterium Methylococcus capsulatus.
 
     0.914
CBL55910.1
Transcriptional regulator ArsR.
 
     0.873
narJ
Nitrate reductase beta chain (fragment); # Nitrite + Acceptor <=> Nitrate + Reduced acceptor # Ferricytochrome c + Nitrite <=> Nitrate + Ferrocytochrome c Ubiquinol + Nitrate <=> Ubiquinone + Nitrite.
 
   
 0.689
CBL55660.1
Extracellular protein without function.
 
  
 0.658
CBL55913.1
Hypothetical outer membrane protein; Signal peptide (SignalP), transmembranaire C term (TM HMM) (carboxypeptidase ?).
       0.473
tatC
Sec-independent protein translocase protein TatC homolog; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.467
CBL55848.1
Hypothetical membrane protein.
  
     0.464
copA
Methylated-DNA-protein-cysteine S-methyltransferase; DNA containing 6-O-methylguanine + Protein L-cysteine <=> Protein S-methyl-L-cysteine + DNA containing guanine.
  
     0.431
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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