STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL55920.1Oxidoreductase. (328 aa)    
Predicted Functional Partners:
iolD
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione acylhydrolase (decyclizing); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA; Belongs to the TPP enzyme family.
  
  
 0.674
iolB
iolB (Myo-inositol catabolism IolB protein); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA.
  
  
 0.663
CBL57833.1
Sugar (xylose) phosphate isomerase/epimerase.
 
    0.549
lysS
Lysyl-tRNA synthetase; ATP + L-Lysine + tRNA(Lys) <=> AMP + Pyrophosphate + L-Lysyl-tRNA; Belongs to the class-II aminoacyl-tRNA synthetase family.
  
    0.528
galK2
Galactokinase; ATP + D-Galactose <=> ADP + alpha-D-Galactose 1-phosphate; Belongs to the GHMP kinase family.
 
 
 0.527
galK1
Galactokinase; ATP + D-Galactose <=> ADP + alpha-D-Galactose 1-phosphate; Belongs to the GHMP kinase family. GalK subfamily.
 
 
 0.519
ask
Aspartokinase (Aspartate kinase); ATP + L-Aspartate <=> ADP + 4-Phospho-L-aspartate; Belongs to the aspartokinase family.
       0.517
CBL57140.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
  
 0.511
iolE
IolE (Myo-inositol catabolism IolAEprotein) (Inosose dehydratase) (2-keto-myo-inositol dehydratase); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA.
  
    0.472
rmlB
dTDP-glucose <=> dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O / dTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
  
 0.467
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.