STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pf774Putative carboxylic ester hydrolase. (412 aa)    
Predicted Functional Partners:
nuoM
NADH dehydrogenase I chain M; Ubiquinol + NAD+ <=> Ubiquinone + NADH + H+.
    
 
 0.787
CBL56314.1
Protein-tyrosine phosphatase; Protein tyrosine phosphate + H2O <=> Protein tyrosine + Orthophosphate.
   
 
 0.782
CBL56909.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.764
CBL56265.1
Hypothetical membrane protein.
  
     0.758
CBL56147.1
6 Protein of unknown function, without similarity to other proteins.
 
     0.756
pf2416
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.751
CBL57034.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.748
CBL57922.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.729
CBL57103.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
    0.721
pf1420
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.714
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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