STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pf279Carboxylic ester hydrolase; Recombinant protein active on 1- naphthyl propionate, extracellular (see dherbecourt 2010, AEM). (443 aa)    
Predicted Functional Partners:
CBL55969.1
6 Protein of unknown function, without similarity to other proteins.
       0.773
caiD
Enoyl-CoA hydratase/carnithine racemase CaiD.
    
 
 0.505
pf774
Putative carboxylic ester hydrolase.
      
 0.467
rplL
50S ribosomal protein L7/L12; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. Is thus essential for accurate translation; Belongs to the bacterial ribosomal protein bL12 family.
   
   0.467
rpmA
50S ribosomal protein L27; Belongs to the bacterial ribosomal protein bL27 family.
   
   0.467
rpmG
50S ribosomal protein L33 RpmG; Belongs to the bacterial ribosomal protein bL33 family.
    
   0.456
rplK
50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.
    
   0.456
rpmJ
6 Protein of unknown function, without similarity to other proteins; Belongs to the bacterial ribosomal protein bL36 family.
    
   0.456
rplQ
50S ribosomal protein L17.
    
   0.456
rspI
30S ribosomal protein S9; Belongs to the universal ribosomal protein uS9 family.
    
   0.456
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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