Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56124.1 | cbiQ2 | PFREUD_05940 | PFREUD_04570 | ABC transporter, ATPase subunit; Belongs to the ABC transporter superfamily. | Cobalt transport protein CbiQ. | 0.583 |
| CBL56888.1 | CBL56889.1 | PFREUD_13710 | PFREUD_13720 | ABC-type transporter, ATPase component. | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | 0.995 |
| CBL56888.1 | cbiE | PFREUD_13710 | PFREUD_07700 | ABC-type transporter, ATPase component. | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | 0.753 |
| CBL56888.1 | cbiM | PFREUD_13710 | PFREUD_04590 | ABC-type transporter, ATPase component. | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.576 |
| CBL56888.1 | cbiQ2 | PFREUD_13710 | PFREUD_04570 | ABC-type transporter, ATPase component. | Cobalt transport protein CbiQ. | 0.641 |
| CBL56889.1 | CBL56888.1 | PFREUD_13720 | PFREUD_13710 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | ABC-type transporter, ATPase component. | 0.995 |
| CBL56889.1 | cbiO1 | PFREUD_13720 | PFREUD_04560 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. | 0.643 |
| CBL56889.1 | cbiO3 | PFREUD_13720 | PFREUD_20190 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | ABC transporter, ATP-binding protein; Locus ABC transporter PF #2140, 2141 et 2475. | 0.643 |
| CBL56889.1 | cbiQ2 | PFREUD_13720 | PFREUD_04570 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | Cobalt transport protein CbiQ. | 0.622 |
| CBL56889.1 | pf2694 | PFREUD_13720 | PFREUD_06140 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | ABC-type transporter, permease components. | 0.595 |
| cbiE | CBL56888.1 | PFREUD_07700 | PFREUD_13710 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | ABC-type transporter, ATPase component. | 0.753 |
| cbiE | cbiM | PFREUD_07700 | PFREUD_04590 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | 0.966 |
| cbiE | cbiN | PFREUD_07700 | PFREUD_04580 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | CbiN is part of the active cobalt transport system involved in uptake of cobalt in to the cell involved with cobalamin biosynthesis (vitamin B12). | 0.964 |
| cbiE | cbiO1 | PFREUD_07700 | PFREUD_04560 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. | 0.791 |
| cbiE | cbiO3 | PFREUD_07700 | PFREUD_20190 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | ABC transporter, ATP-binding protein; Locus ABC transporter PF #2140, 2141 et 2475. | 0.753 |
| cbiE | cbiQ2 | PFREUD_07700 | PFREUD_04570 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | Cobalt transport protein CbiQ. | 0.848 |
| cbiE | cobA | PFREUD_07700 | PFREUD_04550 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | * 2 S-Adenosyl-L-methionine + Uroporphyrinogen III <=> 2 S-Adenosyl-L-homocysteine + Precorrin 2. | 0.949 |
| cbiE | pf2694 | PFREUD_07700 | PFREUD_06140 | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | ABC-type transporter, permease components. | 0.775 |
| cbiM | CBL56888.1 | PFREUD_04590 | PFREUD_13710 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | ABC-type transporter, ATPase component. | 0.576 |
| cbiM | cbiE | PFREUD_04590 | PFREUD_07700 | Cobalt transport protein CbiM; Part of the energy-coupling factor (ECF) transporter complex CbiMNOQ involved in cobalt import. | Precorrin methylase (precorrin-3B C17-methyltransferase) CbiE/G/H fusion protein; S-Adenosyl-L-methionine + Precorrin 3B <=> S-Adenosyl-L-homocysteine + Precorrin 4 / Cobalt-precorrin 3 + S-Adenosyl-L-methionine <=> Cobalt-precorrin 4 + S-Adenosyl-L-homocysteine. | 0.966 |
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