Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56010.1 | CBL56064.1 | PFREUD_04760 | PFREUD_05330 | 6 Protein of unknown function, without similarity to other proteins. | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.480 |
| CBL56062.1 | CBL56063.1 | PFREUD_05310 | PFREUD_05320 | Hypothetical membrane protein. | 6 Protein of unknown function, without similarity to other proteins. | 0.645 |
| CBL56062.1 | CBL56064.1 | PFREUD_05310 | PFREUD_05330 | Hypothetical membrane protein. | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.414 |
| CBL56063.1 | CBL56062.1 | PFREUD_05320 | PFREUD_05310 | 6 Protein of unknown function, without similarity to other proteins. | Hypothetical membrane protein. | 0.645 |
| CBL56063.1 | CBL56064.1 | PFREUD_05320 | PFREUD_05330 | 6 Protein of unknown function, without similarity to other proteins. | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.545 |
| CBL56064.1 | CBL56010.1 | PFREUD_05330 | PFREUD_04760 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 6 Protein of unknown function, without similarity to other proteins. | 0.480 |
| CBL56064.1 | CBL56062.1 | PFREUD_05330 | PFREUD_05310 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Hypothetical membrane protein. | 0.414 |
| CBL56064.1 | CBL56063.1 | PFREUD_05330 | PFREUD_05320 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 6 Protein of unknown function, without similarity to other proteins. | 0.545 |
| CBL56064.1 | CBL56065.1 | PFREUD_05330 | PFREUD_05340 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Thiamine pyrophosphate (TPP family). | 0.540 |
| CBL56064.1 | CBL56066.1 | PFREUD_05330 | PFREUD_05350 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.540 |
| CBL56064.1 | gap | PFREUD_05330 | PFREUD_15130 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | D-glyceraldehyde-3-phosphate + phosphate + NAD+ = 1,3-diphosphateglycerate + NADH // D-Erythrose 4-phosphate + NAD+ + H2O <=> 4-Phospho-D-erythronate + NADH + H+ et; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | 0.440 |
| CBL56064.1 | pepN | PFREUD_05330 | PFREUD_08100 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Aminopeptidase with broad substrate specificity. Preference for leucine, cleaves also next to Arg and lysine. Release of an N-terminal aa, Xaa-|-Yaa-. Xaa is preferably Ala. Xaa-Pro may be released. Peptidase M1 family. Monomer. Binds 1 zinc ion per subunit, Cytoplasmic. | 0.762 |
| CBL56064.1 | polA | PFREUD_05330 | PFREUD_15360 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Putative DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.701 |
| CBL56064.1 | ruvB | PFREUD_05330 | PFREUD_11700 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | Holliday junction ATP-dependent DNA helicase; The RuvA-RuvB complex in the presence of ATP renatures cruciform structure in supercoiled DNA with palindromic sequence, indicating that it may promote strand exchange reactions in homologous recombination. RuvAB is a helicase that mediates the Holliday junction migration by localized denaturation and reannealing. | 0.491 |
| CBL56064.1 | truA | PFREUD_05330 | PFREUD_06200 | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | tRNA pseudouridine synthase A (tRNA-uridine isomerase I) (tRNA pseudouridylate synthase I); Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs. | 0.547 |
| CBL56065.1 | CBL56064.1 | PFREUD_05340 | PFREUD_05330 | Thiamine pyrophosphate (TPP family). | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.540 |
| CBL56065.1 | CBL56066.1 | PFREUD_05340 | PFREUD_05350 | Thiamine pyrophosphate (TPP family). | Pyruvate flavodoxin/ferredoxin oxidoreductase. | 0.999 |
| CBL56066.1 | CBL56064.1 | PFREUD_05350 | PFREUD_05330 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.540 |
| CBL56066.1 | CBL56065.1 | PFREUD_05350 | PFREUD_05340 | Pyruvate flavodoxin/ferredoxin oxidoreductase. | Thiamine pyrophosphate (TPP family). | 0.999 |
| gap | CBL56064.1 | PFREUD_15130 | PFREUD_05330 | D-glyceraldehyde-3-phosphate + phosphate + NAD+ = 1,3-diphosphateglycerate + NADH // D-Erythrose 4-phosphate + NAD+ + H2O <=> 4-Phospho-D-erythronate + NADH + H+ et; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family. | Metalloprotease (Peptidase family M13); In bacteria they may be used for digestion of milk. believed to be involved with milk protein cleavage. | 0.440 |
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