Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56163.1 | CBL56164.1 | PFREUD_06330 | PFREUD_06340 | 5.2 Protein of unknown function similar to proteins from other organisms. | Peptidase, family M22. | 0.993 |
| CBL56163.1 | bluB/cobT2 | PFREUD_06330 | PFREUD_06370 | 5.2 Protein of unknown function similar to proteins from other organisms. | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | 0.574 |
| CBL56163.1 | gcp | PFREUD_06330 | PFREUD_06360 | 5.2 Protein of unknown function similar to proteins from other organisms. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.988 |
| CBL56163.1 | pheT | PFREUD_06330 | PFREUD_14010 | 5.2 Protein of unknown function similar to proteins from other organisms. | Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS); ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Pyrophosphate + L-Phenylalanyl-tRNA(Phe); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.505 |
| CBL56163.1 | rimI | PFREUD_06330 | PFREUD_06350 | 5.2 Protein of unknown function similar to proteins from other organisms. | Ribosomal-protein-alanine acetyltransferase; Acetyl-CoA + Ribosomal-protein L-alanine <=> CoA + Ribosomal-protein N-acetyl-L-alanine. | 0.900 |
| CBL56164.1 | CBL56163.1 | PFREUD_06340 | PFREUD_06330 | Peptidase, family M22. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.993 |
| CBL56164.1 | bluB/cobT2 | PFREUD_06340 | PFREUD_06370 | Peptidase, family M22. | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | 0.625 |
| CBL56164.1 | gcp | PFREUD_06340 | PFREUD_06360 | Peptidase, family M22. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.995 |
| CBL56164.1 | pheT | PFREUD_06340 | PFREUD_14010 | Peptidase, family M22. | Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS); ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Pyrophosphate + L-Phenylalanyl-tRNA(Phe); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.455 |
| CBL56164.1 | rimI | PFREUD_06340 | PFREUD_06350 | Peptidase, family M22. | Ribosomal-protein-alanine acetyltransferase; Acetyl-CoA + Ribosomal-protein L-alanine <=> CoA + Ribosomal-protein N-acetyl-L-alanine. | 0.922 |
| CBL56724.1 | gcp | PFREUD_12020 | PFREUD_06360 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.647 |
| CBL57352.1 | gcp | PFREUD_18600 | PFREUD_06360 | 5.2 Protein of unknown function similar to proteins from other organisms. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.973 |
| bluB/cobT2 | CBL56163.1 | PFREUD_06370 | PFREUD_06330 | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.574 |
| bluB/cobT2 | CBL56164.1 | PFREUD_06370 | PFREUD_06340 | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | Peptidase, family M22. | 0.625 |
| bluB/cobT2 | gcp | PFREUD_06370 | PFREUD_06360 | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.697 |
| bluB/cobT2 | rimI | PFREUD_06370 | PFREUD_06350 | Phosphoribosyltransferase/nitroreductase (fusion gene) (Nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase). | Ribosomal-protein-alanine acetyltransferase; Acetyl-CoA + Ribosomal-protein L-alanine <=> CoA + Ribosomal-protein N-acetyl-L-alanine. | 0.570 |
| gcp | CBL56163.1 | PFREUD_06360 | PFREUD_06330 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.988 |
| gcp | CBL56164.1 | PFREUD_06360 | PFREUD_06340 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Peptidase, family M22. | 0.995 |
| gcp | CBL56724.1 | PFREUD_06360 | PFREUD_12020 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.647 |
| gcp | CBL57352.1 | PFREUD_06360 | PFREUD_18600 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.973 |
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