Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56175.1 | CBL57145.1 | PFREUD_06450 | PFREUD_16450 | Permease binding-protein component ABC transporter. | ABC transporter glycine betaine ?. | 0.928 |
| CBL56175.1 | opuBB | PFREUD_06450 | PFREUD_06440 | Permease binding-protein component ABC transporter. | Permease membrane component ABC transporter OpuBB. | 0.999 |
| CBL56175.1 | opuCA | PFREUD_06450 | PFREUD_06430 | Permease binding-protein component ABC transporter. | Glycine betaine/carnitine/choline transport ATP-binding protein opuCA. | 0.996 |
| CBL56175.1 | opuCB | PFREUD_06450 | PFREUD_06420 | Permease binding-protein component ABC transporter. | ABC transporter, permease protein OpuCB. | 0.999 |
| CBL56175.1 | proV | PFREUD_06450 | PFREUD_23300 | Permease binding-protein component ABC transporter. | ABC-type glycine betaine transport, ATP-binding protein. | 0.985 |
| CBL56175.1 | proW | PFREUD_06450 | PFREUD_23310 | Permease binding-protein component ABC transporter. | ABC-type glycine betaine transport protein. | 0.972 |
| CBL56175.1 | proZ | PFREUD_06450 | PFREUD_23320 | Permease binding-protein component ABC transporter. | PROZ-like protein (ABC-type glycine betaine transport, permease protein). | 0.997 |
| CBL56530.1 | opuCA | PFREUD_10060 | PFREUD_06430 | ATP-binding ABC transporter protein. | Glycine betaine/carnitine/choline transport ATP-binding protein opuCA. | 0.810 |
| CBL56530.1 | proV | PFREUD_10060 | PFREUD_23300 | ATP-binding ABC transporter protein. | ABC-type glycine betaine transport, ATP-binding protein. | 0.899 |
| CBL57145.1 | CBL56175.1 | PFREUD_16450 | PFREUD_06450 | ABC transporter glycine betaine ?. | Permease binding-protein component ABC transporter. | 0.928 |
| CBL57145.1 | opuBB | PFREUD_16450 | PFREUD_06440 | ABC transporter glycine betaine ?. | Permease membrane component ABC transporter OpuBB. | 0.993 |
| CBL57145.1 | opuCA | PFREUD_16450 | PFREUD_06430 | ABC transporter glycine betaine ?. | Glycine betaine/carnitine/choline transport ATP-binding protein opuCA. | 0.985 |
| CBL57145.1 | opuCB | PFREUD_16450 | PFREUD_06420 | ABC transporter glycine betaine ?. | ABC transporter, permease protein OpuCB. | 0.976 |
| CBL57145.1 | proV | PFREUD_16450 | PFREUD_23300 | ABC transporter glycine betaine ?. | ABC-type glycine betaine transport, ATP-binding protein. | 0.986 |
| CBL57145.1 | proW | PFREUD_16450 | PFREUD_23310 | ABC transporter glycine betaine ?. | ABC-type glycine betaine transport protein. | 0.986 |
| CBL57145.1 | proZ | PFREUD_16450 | PFREUD_23320 | ABC transporter glycine betaine ?. | PROZ-like protein (ABC-type glycine betaine transport, permease protein). | 0.992 |
| cysK | dnaJ3 | PFREUD_12630 | PFREUD_08760 | Cysteine synthase (O-acetylserine sulfhydrylase); O3-acetyl-L-serine + H2S = L-cysteine + acetate. COFACTOR: Pyridoxal phosphate Belongs to the cysteine synthase/cystathionine beta-synthase family. | Chaperone protein dnaJ 3 (DnaJ3 protein) (Heat shock protein 40 3); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds o [...] | 0.400 |
| cysK | opuCA | PFREUD_12630 | PFREUD_06430 | Cysteine synthase (O-acetylserine sulfhydrylase); O3-acetyl-L-serine + H2S = L-cysteine + acetate. COFACTOR: Pyridoxal phosphate Belongs to the cysteine synthase/cystathionine beta-synthase family. | Glycine betaine/carnitine/choline transport ATP-binding protein opuCA. | 0.658 |
| dnaJ3 | cysK | PFREUD_08760 | PFREUD_12630 | Chaperone protein dnaJ 3 (DnaJ3 protein) (Heat shock protein 40 3); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds o [...] | Cysteine synthase (O-acetylserine sulfhydrylase); O3-acetyl-L-serine + H2S = L-cysteine + acetate. COFACTOR: Pyridoxal phosphate Belongs to the cysteine synthase/cystathionine beta-synthase family. | 0.400 |
| dnaJ3 | opuCA | PFREUD_08760 | PFREUD_06430 | Chaperone protein dnaJ 3 (DnaJ3 protein) (Heat shock protein 40 3); Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds o [...] | Glycine betaine/carnitine/choline transport ATP-binding protein opuCA. | 0.640 |
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