Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56195.1 | CBL56198.1 | PFREUD_06640 | PFREUD_06670 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | 0.997 |
| CBL56195.1 | araA | PFREUD_06640 | PFREUD_06610 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | L-arabinose isomerase (L-arabinose aldose-ketose-isomerase); Catalyzes the conversion of L-arabinose to L-ribulose. | 0.440 |
| CBL56195.1 | biaA | PFREUD_06640 | PFREUD_06630 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Locus abc transport. | 0.999 |
| CBL56195.1 | frk | PFREUD_06640 | PFREUD_03920 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Fructokinase; ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate. | 0.504 |
| CBL56195.1 | lacI1 | PFREUD_06640 | PFREUD_06620 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Arabinose operon repressor. | 0.651 |
| CBL56195.1 | lacI3 | PFREUD_06640 | PFREUD_23140 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.459 |
| CBL56195.1 | lacI4 | PFREUD_06640 | PFREUD_23210 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Transcriptional regulator, LacI family (HTH-type transcriptional regulator degA). | 0.437 |
| CBL56195.1 | pfkB | PFREUD_06640 | PFREUD_02780 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Carbohydrate kinase, PfkB. | 0.425 |
| CBL56195.1 | rbsK | PFREUD_06640 | PFREUD_03250 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Carbohydrate or pyrimidine kinases PfkB family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.478 |
| CBL56195.1 | ytfT | PFREUD_06640 | PFREUD_06660 | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | Ribose transport system permease protein RbsC, Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.994 |
| CBL56198.1 | CBL56195.1 | PFREUD_06670 | PFREUD_06640 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | 0.997 |
| CBL56198.1 | biaA | PFREUD_06670 | PFREUD_06630 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Locus abc transport. | 0.997 |
| CBL56198.1 | frk | PFREUD_06670 | PFREUD_03920 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Fructokinase; ATP + D-Fructose <=> ADP + D-Fructose 6-phosphate. | 0.467 |
| CBL56198.1 | lacI1 | PFREUD_06670 | PFREUD_06620 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Arabinose operon repressor. | 0.626 |
| CBL56198.1 | lacI3 | PFREUD_06670 | PFREUD_23140 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain. | 0.457 |
| CBL56198.1 | lacI4 | PFREUD_06670 | PFREUD_23210 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Transcriptional regulator, LacI family (HTH-type transcriptional regulator degA). | 0.424 |
| CBL56198.1 | rbsK | PFREUD_06670 | PFREUD_03250 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Carbohydrate or pyrimidine kinases PfkB family; Catalyzes the phosphorylation of ribose at O-5 in a reaction requiring ATP and magnesium. The resulting D-ribose-5-phosphate can then be used either for sythesis of nucleotides, histidine, and tryptophan, or as a component of the pentose phosphate pathway. | 0.441 |
| CBL56198.1 | ytfT | PFREUD_06670 | PFREUD_06660 | Probable ABC transporter permease protein for sugars; Locus abc transport; Belongs to the binding-protein-dependent transport system permease family. | Ribose transport system permease protein RbsC, Putative ABC transporter permease protein; Belongs to the binding-protein-dependent transport system permease family. | 0.984 |
| araA | CBL56195.1 | PFREUD_06610 | PFREUD_06640 | L-arabinose isomerase (L-arabinose aldose-ketose-isomerase); Catalyzes the conversion of L-arabinose to L-ribulose. | ATP binding protein of ABC transporter, ATPase component; Molecular function: ATP binding. Responsible for energy coupling to the transport system. | 0.440 |
| araA | biaA | PFREUD_06610 | PFREUD_06630 | L-arabinose isomerase (L-arabinose aldose-ketose-isomerase); Catalyzes the conversion of L-arabinose to L-ribulose. | Locus abc transport. | 0.571 |
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