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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL56276.1Transmembrane transport protein. (479 aa)    
Predicted Functional Partners:
CBL56627.1
Integral membrane transport protein.
  
  
 0.741
CBL57238.1
Transmembrane efflux protein.
  
     0.722
CBL55693.1
Efflux permease; Belongs to the major facilitator superfamily.
  
     0.717
hemX
Membrane-bound transport protein (HemX protein); Involved in porphyrin synthesis; Belongs to the major facilitator superfamily.
  
     0.710
CBL55502.1
Multidrug resistance transporter, MFS superfamily protein; Belongs to the major facilitator superfamily.
  
    0.693
CBL57148.1
Major facilitator superfamily.
  
    0.688
CBL57921.1
Permease of the major facilitator superfamily.
  
     0.656
lmrB
Permease (Lincomycin resistance protein); Proton-dependent transporter. May mediate the efflux of lincomycin; Belongs to the major facilitator superfamily.
  
     0.650
CBL56275.1
5.2 Protein of unknown function similar to proteins from other organisms.
       0.593
CBL57271.1
Probable multidrug resistance transporter, MFS superfamily.
  
     0.538
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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