Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56288.1 | CBL56364.1 | PFREUD_07570 | PFREUD_08370 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.506 |
| CBL56288.1 | CBL56386.1 | PFREUD_07570 | PFREUD_08600 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.667 |
| CBL56288.1 | CBL56506.1 | PFREUD_07570 | PFREUD_09810 | 5.2 Protein of unknown function similar to proteins from other organisms. | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | 0.548 |
| CBL56288.1 | CBL56915.1 | PFREUD_07570 | PFREUD_14150 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.621 |
| CBL56288.1 | CBL57330.1 | PFREUD_07570 | PFREUD_18230 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.700 |
| CBL56288.1 | clpS | PFREUD_07570 | PFREUD_07560 | 5.2 Protein of unknown function similar to proteins from other organisms. | ATP-dependent Clp protease adaptor protein clpS; Involved in the modulation of the specificity of the ClpAP- mediated ATP-dependent protein degradation; Belongs to the ClpS family. | 0.896 |
| CBL56288.1 | merR1 | PFREUD_07570 | PFREUD_12330 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.733 |
| CBL56288.1 | murI | PFREUD_07570 | PFREUD_07580 | 5.2 Protein of unknown function similar to proteins from other organisms. | Glutamate racemase; Provides the (R)-glutamate required for cell wall biosynthesis. | 0.655 |
| CBL56288.1 | pigV | PFREUD_07570 | PFREUD_23620 | 5.2 Protein of unknown function similar to proteins from other organisms. | GPI mannosyltransferase 2; Alpha-1,6-mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the second mannose to the glycosylphosphatidylinositol during GPI precursor assembly. | 0.517 |
| CBL56288.1 | pncB | PFREUD_07570 | PFREUD_07550 | 5.2 Protein of unknown function similar to proteins from other organisms. | Nicotinate phosphoribosyltransferase; Catalyzes the first step in the biosynthesis of NAD from nicotinic acid, the ATP-dependent synthesis of beta-nicotinate D- ribonucleotide from nicotinate and 5-phospho-D-ribose 1-phosphate. Belongs to the NAPRTase family. | 0.660 |
| CBL56364.1 | CBL56288.1 | PFREUD_08370 | PFREUD_07570 | 6 Protein of unknown function, without similarity to other proteins. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.506 |
| CBL56364.1 | CBL56386.1 | PFREUD_08370 | PFREUD_08600 | 6 Protein of unknown function, without similarity to other proteins. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.548 |
| CBL56386.1 | CBL56288.1 | PFREUD_08600 | PFREUD_07570 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.667 |
| CBL56386.1 | CBL56364.1 | PFREUD_08600 | PFREUD_08370 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.548 |
| CBL56386.1 | CBL56506.1 | PFREUD_08600 | PFREUD_09810 | 5.2 Protein of unknown function similar to proteins from other organisms. | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | 0.467 |
| CBL56386.1 | CBL56915.1 | PFREUD_08600 | PFREUD_14150 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.498 |
| CBL56386.1 | CBL57330.1 | PFREUD_08600 | PFREUD_18230 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.414 |
| CBL56386.1 | pigV | PFREUD_08600 | PFREUD_23620 | 5.2 Protein of unknown function similar to proteins from other organisms. | GPI mannosyltransferase 2; Alpha-1,6-mannosyltransferase involved in glycosylphosphatidylinositol-anchor biosynthesis. Transfers the second mannose to the glycosylphosphatidylinositol during GPI precursor assembly. | 0.496 |
| CBL56506.1 | CBL56288.1 | PFREUD_09810 | PFREUD_07570 | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.548 |
| CBL56506.1 | CBL56386.1 | PFREUD_09810 | PFREUD_08600 | ATP-dependent DNA helicase; REP helicases catalyse ATP dependent unwinding of double stranded DNA to single stranded DNA; Belongs to the helicase family. UvrD subfamily. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.467 |
page 1 of 3