Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56331.1 | CBL56333.1 | PFREUD_08040 | PFREUD_08060 | Oxidoreductase. | Long-chain fatty-acid CoA ligase (AMP-binding enzyme) (long-chain-fatty-acid---CoA ligase); ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Pyrophosphate / ATP + Long-chain carboxylate + CoA <=> AMP + Pyrophosphate + Acyl-CoA. | 0.586 |
| CBL56331.1 | CBL57355.1 | PFREUD_08040 | PFREUD_18630 | Oxidoreductase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.723 |
| CBL56331.1 | CBL57356.1 | PFREUD_08040 | PFREUD_18640 | Oxidoreductase. | Iron-sulfur protein. | 0.783 |
| CBL56331.1 | fixA | PFREUD_08040 | PFREUD_02480 | Oxidoreductase. | Electron transfer flavoprotein (FixA protein); Required for anaerobic carnitine reduction. May bring reductant to caiA. | 0.730 |
| CBL56331.1 | fixB | PFREUD_08040 | PFREUD_02490 | Oxidoreductase. | Electron transfer flavoprotein, carnitine metabolism (FixB protein); Required for anaerobic carnitine reduction. May bring reductant to caiA. | 0.707 |
| CBL56331.1 | gltB | PFREUD_08040 | PFREUD_11860 | Oxidoreductase. | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | 0.777 |
| CBL56331.1 | lldP | PFREUD_08040 | PFREUD_18660 | Oxidoreductase. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.643 |
| CBL56331.1 | marR1-2 | PFREUD_08040 | PFREUD_08050 | Oxidoreductase. | Pfam01047, MarR, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. | 0.848 |
| CBL56331.1 | nifJ1 | PFREUD_08040 | PFREUD_01840 | Oxidoreductase. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.851 |
| CBL56331.1 | nifJ2 | PFREUD_08040 | PFREUD_07070 | Oxidoreductase. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.853 |
| CBL56333.1 | CBL56331.1 | PFREUD_08060 | PFREUD_08040 | Long-chain fatty-acid CoA ligase (AMP-binding enzyme) (long-chain-fatty-acid---CoA ligase); ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Pyrophosphate / ATP + Long-chain carboxylate + CoA <=> AMP + Pyrophosphate + Acyl-CoA. | Oxidoreductase. | 0.586 |
| CBL56333.1 | marR1-2 | PFREUD_08060 | PFREUD_08050 | Long-chain fatty-acid CoA ligase (AMP-binding enzyme) (long-chain-fatty-acid---CoA ligase); ATP + Hexadecanoic acid + CoA <=> AMP + Palmitoyl-CoA + Pyrophosphate / ATP + Long-chain carboxylate + CoA <=> AMP + Pyrophosphate + Acyl-CoA. | Pfam01047, MarR, MarR family. The Mar proteins are involved in the multiple antibiotic resistance, a non-specific resistance system. | 0.567 |
| CBL57355.1 | CBL56331.1 | PFREUD_18630 | PFREUD_08040 | 5.2 Protein of unknown function similar to proteins from other organisms. | Oxidoreductase. | 0.723 |
| CBL57355.1 | CBL57356.1 | PFREUD_18630 | PFREUD_18640 | 5.2 Protein of unknown function similar to proteins from other organisms. | Iron-sulfur protein. | 0.999 |
| CBL57355.1 | lldP | PFREUD_18630 | PFREUD_18660 | 5.2 Protein of unknown function similar to proteins from other organisms. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.901 |
| CBL57355.1 | nifJ2 | PFREUD_18630 | PFREUD_07070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Pyruvate:ferredoxin (Flavodoxin) oxidoreductase. | 0.824 |
| CBL57356.1 | CBL56331.1 | PFREUD_18640 | PFREUD_08040 | Iron-sulfur protein. | Oxidoreductase. | 0.783 |
| CBL57356.1 | CBL57355.1 | PFREUD_18640 | PFREUD_18630 | Iron-sulfur protein. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.999 |
| CBL57356.1 | lldP | PFREUD_18640 | PFREUD_18660 | Iron-sulfur protein. | L-lactate permease; Transports L-lactate across the membrane. Can also transport D-lactate and glycolate; Belongs to the lactate permease family. | 0.938 |
| CBL57356.1 | nifJ1 | PFREUD_18640 | PFREUD_01840 | Iron-sulfur protein. | Oxidoreductase required for the transfer of electrons from pyruvate to flavodoxin, which reduces nitrogenase, Pyruvate + CoA + oxidized flavodoxin = acetyl-CoA + CO2 + reduced flavodoxin. | 0.859 |
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