Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56034.1 | comEC | PFREUD_05030 | PFREUD_08650 | dCMP + H2O <=> dUMP + NH3 Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP. | ComE operon protein 3. | 0.609 |
| CBL56390.1 | CBL57079.1 | PFREUD_08640 | PFREUD_15810 | 6 Protein of unknown function, without similarity to other proteins. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.664 |
| CBL56390.1 | comEC | PFREUD_08640 | PFREUD_08650 | 6 Protein of unknown function, without similarity to other proteins. | ComE operon protein 3. | 0.917 |
| CBL56390.1 | holA | PFREUD_08640 | PFREUD_08660 | 6 Protein of unknown function, without similarity to other proteins. | DNA polymerase III, delta subunit. | 0.524 |
| CBL57079.1 | CBL56390.1 | PFREUD_15810 | PFREUD_08640 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.664 |
| CBL57079.1 | CBL57764.1 | PFREUD_15810 | PFREUD_22600 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.573 |
| CBL57079.1 | comEC | PFREUD_15810 | PFREUD_08650 | 5.2 Protein of unknown function similar to proteins from other organisms. | ComE operon protein 3. | 0.821 |
| CBL57079.1 | dprA | PFREUD_15810 | PFREUD_14230 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA processing / uptake protein; DNA mediated transformation. | 0.573 |
| CBL57764.1 | CBL57079.1 | PFREUD_22600 | PFREUD_15810 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.573 |
| CBL57764.1 | comEC | PFREUD_22600 | PFREUD_08650 | 5.2 Protein of unknown function similar to proteins from other organisms. | ComE operon protein 3. | 0.645 |
| CBL57764.1 | prt | PFREUD_22600 | PFREUD_09670 | 5.2 Protein of unknown function similar to proteins from other organisms. | Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage. Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. | 0.571 |
| CBL57764.1 | recA | PFREUD_22600 | PFREUD_13130 | 5.2 Protein of unknown function similar to proteins from other organisms. | RecA (Recombinase A); Can catalyze the hydrolysis of ATP in the presence of single- stranded DNA, the ATP-dependent uptake of single-stranded DNA by duplex DNA, and the ATP-dependent hybridization of homologous single-stranded DNAs. It interacts with LexA causing its activation and leading to its autocatalytic cleavage; Belongs to the RecA family. | 0.438 |
| comEC | CBL56034.1 | PFREUD_08650 | PFREUD_05030 | ComE operon protein 3. | dCMP + H2O <=> dUMP + NH3 Deoxycytidylate deaminase catalyzes the deamination of dCMP to dUMP. | 0.609 |
| comEC | CBL56390.1 | PFREUD_08650 | PFREUD_08640 | ComE operon protein 3. | 6 Protein of unknown function, without similarity to other proteins. | 0.917 |
| comEC | CBL57079.1 | PFREUD_08650 | PFREUD_15810 | ComE operon protein 3. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.821 |
| comEC | CBL57764.1 | PFREUD_08650 | PFREUD_22600 | ComE operon protein 3. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.645 |
| comEC | dprA | PFREUD_08650 | PFREUD_14230 | ComE operon protein 3. | DNA processing / uptake protein; DNA mediated transformation. | 0.903 |
| comEC | holA | PFREUD_08650 | PFREUD_08660 | ComE operon protein 3. | DNA polymerase III, delta subunit. | 0.901 |
| comEC | pheT | PFREUD_08650 | PFREUD_14010 | ComE operon protein 3. | Phenylalanyl-tRNA synthetase beta chain (Phenylalanine--tRNA ligase beta chain) (PheRS); ATP + L-Phenylalanine + tRNA(Phe) <=> AMP + Pyrophosphate + L-Phenylalanyl-tRNA(Phe); Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily. | 0.839 |
| comEC | prt | PFREUD_08650 | PFREUD_09670 | ComE operon protein 3. | Members of Phosphoribosyltransferase (PRT) are catalytic and are regulatory proteins involved in nucleotide synthesis and salvage. Not all PRT proteins are enzymes. For example, in some bacteria PRT proteins regulate the expression of purine and pyrimidine synthetic genes. | 0.863 |
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