Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56404.1 | CBL56406.1 | PFREUD_08780 | PFREUD_08800 | Metallophosphoesterase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.454 |
| CBL56404.1 | CBL56552.1 | PFREUD_08780 | PFREUD_10280 | Metallophosphoesterase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.677 |
| CBL56404.1 | CBL57306.1 | PFREUD_08780 | PFREUD_17980 | Metallophosphoesterase. | Hypothetical membrane protein. | 0.469 |
| CBL56404.1 | tgt | PFREUD_08780 | PFREUD_08790 | Metallophosphoesterase. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.553 |
| CBL56406.1 | CBL56404.1 | PFREUD_08800 | PFREUD_08780 | 5.2 Protein of unknown function similar to proteins from other organisms. | Metallophosphoesterase. | 0.454 |
| CBL56406.1 | CBL56498.1 | PFREUD_08800 | PFREUD_09730 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.487 |
| CBL56406.1 | CBL56552.1 | PFREUD_08800 | PFREUD_10280 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.491 |
| CBL56406.1 | CBL56725.1 | PFREUD_08800 | PFREUD_12030 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.477 |
| CBL56406.1 | CBL57055.1 | PFREUD_08800 | PFREUD_15570 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.461 |
| CBL56406.1 | CBL57225.1 | PFREUD_08800 | PFREUD_17140 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.642 |
| CBL56406.1 | CBL57306.1 | PFREUD_08800 | PFREUD_17980 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.496 |
| CBL56406.1 | pip2 | PFREUD_08800 | PFREUD_08810 | 5.2 Protein of unknown function similar to proteins from other organisms. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.551 |
| CBL56406.1 | tgt | PFREUD_08800 | PFREUD_08790 | 5.2 Protein of unknown function similar to proteins from other organisms. | Queuine tRNA-ribosyltransferase; Catalyzes the base-exchange of a guanine (G) residue with the queuine precursor 7-aminomethyl-7-deazaguanine (PreQ1) at position 34 (anticodon wobble position) in tRNAs with GU(N) anticodons (tRNA-Asp, - Asn, -His and -Tyr). Catalysis occurs through a double-displacement mechanism. The nucleophile active site attacks the C1' of nucleotide 34 to detach the guanine base from the RNA, forming a covalent enzyme-RNA intermediate. The proton acceptor active site deprotonates the incoming PreQ1, allowing a nucleophilic attack on the C1' of the ribose to form t [...] | 0.513 |
| CBL56406.1 | urvD | PFREUD_08800 | PFREUD_09820 | 5.2 Protein of unknown function similar to proteins from other organisms. | UvrD/REP helicase / ATP-dependent DNA helicase; Belongs to the helicase family. UvrD subfamily. | 0.481 |
| CBL56498.1 | CBL56406.1 | PFREUD_09730 | PFREUD_08800 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.487 |
| CBL56498.1 | CBL57306.1 | PFREUD_09730 | PFREUD_17980 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.615 |
| CBL56552.1 | CBL56404.1 | PFREUD_10280 | PFREUD_08780 | 5.2 Protein of unknown function similar to proteins from other organisms. | Metallophosphoesterase. | 0.677 |
| CBL56552.1 | CBL56406.1 | PFREUD_10280 | PFREUD_08800 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.491 |
| CBL56552.1 | CBL56725.1 | PFREUD_10280 | PFREUD_12030 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.708 |
| CBL56552.1 | CBL57306.1 | PFREUD_10280 | PFREUD_17980 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.767 |
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