Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56406.1 | CBL56408.1 | PFREUD_08800 | PFREUD_08820 | 5.2 Protein of unknown function similar to proteins from other organisms. | 6 Protein of unknown function, without similarity to other proteins. | 0.439 |
| CBL56406.1 | pip2 | PFREUD_08800 | PFREUD_08810 | 5.2 Protein of unknown function similar to proteins from other organisms. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.551 |
| CBL56408.1 | CBL56406.1 | PFREUD_08820 | PFREUD_08800 | 6 Protein of unknown function, without similarity to other proteins. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.439 |
| CBL56408.1 | CBL56409.1 | PFREUD_08820 | PFREUD_08830 | 6 Protein of unknown function, without similarity to other proteins. | Transporter, MFS superfamily protein. | 0.533 |
| CBL56408.1 | pip2 | PFREUD_08820 | PFREUD_08810 | 6 Protein of unknown function, without similarity to other proteins. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.601 |
| CBL56409.1 | CBL56408.1 | PFREUD_08830 | PFREUD_08820 | Transporter, MFS superfamily protein. | 6 Protein of unknown function, without similarity to other proteins. | 0.533 |
| CBL56409.1 | phoH | PFREUD_08830 | PFREUD_08840 | Transporter, MFS superfamily protein. | Phosphate starvation-inducible protein PhoH-like protein. | 0.496 |
| CBL56409.1 | pip2 | PFREUD_08830 | PFREUD_08810 | Transporter, MFS superfamily protein. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.426 |
| acpP | fabG | PFREUD_09420 | PFREUD_14870 | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.842 |
| acpP | pip2 | PFREUD_09420 | PFREUD_08810 | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.750 |
| caiA | fad | PFREUD_02420 | PFREUD_04330 | Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase); Fatty acid metabolism and xenobiotic degradation. | Acyl-CoA dehydrogenase. | 0.473 |
| caiA | pip2 | PFREUD_02420 | PFREUD_08810 | Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase); Fatty acid metabolism and xenobiotic degradation. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.458 |
| comEC | phoH | PFREUD_08650 | PFREUD_08840 | ComE operon protein 3. | Phosphate starvation-inducible protein PhoH-like protein. | 0.403 |
| comEC | pip2 | PFREUD_08650 | PFREUD_08810 | ComE operon protein 3. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.411 |
| comEC | proC | PFREUD_08650 | PFREUD_20090 | ComE operon protein 3. | Delta 1-pyrroline-5-carboxylate reductase; Catalyzes the reduction of 1-pyrroline-5-carboxylate (PCA) to L-proline. | 0.577 |
| fabG | acpP | PFREUD_14870 | PFREUD_09420 | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis. | 0.842 |
| fabG | pip2 | PFREUD_14870 | PFREUD_08810 | 3-oxoacyl-[acyl-carrier protein] reductase; Catalyzes the NADPH-dependent reduction of beta-ketoacyl-ACP substrates to beta-hydroxyacyl-ACP products, the first reductive step in the elongation cycle of fatty acid biosynthesis. Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.457 |
| fad | caiA | PFREUD_04330 | PFREUD_02420 | Acyl-CoA dehydrogenase. | Crotonobetainyl-CoA dehydrogenase (Crotonobetainyl-CoA reductase); Fatty acid metabolism and xenobiotic degradation. | 0.473 |
| fad | pip2 | PFREUD_04330 | PFREUD_08810 | Acyl-CoA dehydrogenase. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.458 |
| phoH | CBL56409.1 | PFREUD_08840 | PFREUD_08830 | Phosphate starvation-inducible protein PhoH-like protein. | Transporter, MFS superfamily protein. | 0.496 |
page 1 of 2