Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56409.1 | phoH | PFREUD_08830 | PFREUD_08840 | Transporter, MFS superfamily protein. | Phosphate starvation-inducible protein PhoH-like protein. | 0.496 |
| CBL56409.1 | pip2 | PFREUD_08830 | PFREUD_08810 | Transporter, MFS superfamily protein. | Proline iminopeptidase; Specifically catalyzes the removal of N-terminal proline residues from peptides, Release of N-terminal proline from a peptide, Belongs to the peptidase S33 family, cytoplasmic. | 0.426 |
| CBL56409.1 | ybeY | PFREUD_08830 | PFREUD_08850 | Transporter, MFS superfamily protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.419 |
| CBL56412.1 | era | PFREUD_08860 | PFREUD_08870 | Hypothetical secreted protein. | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.871 |
| CBL56412.1 | phoH | PFREUD_08860 | PFREUD_08840 | Hypothetical secreted protein. | Phosphate starvation-inducible protein PhoH-like protein. | 0.661 |
| CBL56412.1 | ybeY | PFREUD_08860 | PFREUD_08850 | Hypothetical secreted protein. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.778 |
| CBL56660.1 | cmk | PFREUD_11380 | PFREUD_11270 | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase); Cytidylate kinase EC:2.7.4.14 catalyses the phosphorylation of cytidine 5prime-monophosphate (dCMP) to cytidine 5prime-diphosphate (dCDP) in the presence of ATP or GTP. | 0.535 |
| CBL56660.1 | era | PFREUD_11380 | PFREUD_08870 | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | 0.555 |
| CBL56660.1 | phoH | PFREUD_11380 | PFREUD_08840 | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Phosphate starvation-inducible protein PhoH-like protein. | 0.575 |
| CBL56660.1 | ybeY | PFREUD_11380 | PFREUD_08850 | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.449 |
| cmk | CBL56660.1 | PFREUD_11270 | PFREUD_11380 | Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase); Cytidylate kinase EC:2.7.4.14 catalyses the phosphorylation of cytidine 5prime-monophosphate (dCMP) to cytidine 5prime-diphosphate (dCDP) in the presence of ATP or GTP. | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.535 |
| cmk | phoH | PFREUD_11270 | PFREUD_08840 | Cytidylate kinase (CK) (Cytidine monophosphate kinase) (CMP kinase); Cytidylate kinase EC:2.7.4.14 catalyses the phosphorylation of cytidine 5prime-monophosphate (dCMP) to cytidine 5prime-diphosphate (dCDP) in the presence of ATP or GTP. | Phosphate starvation-inducible protein PhoH-like protein. | 0.512 |
| era | CBL56412.1 | PFREUD_08870 | PFREUD_08860 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical secreted protein. | 0.871 |
| era | CBL56660.1 | PFREUD_08870 | PFREUD_11380 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.555 |
| era | phoH | PFREUD_08870 | PFREUD_08840 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Phosphate starvation-inducible protein PhoH-like protein. | 0.799 |
| era | recO | PFREUD_08870 | PFREUD_08950 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | DNA repair protein recO (Recombination protein O); Involved in DNA repair and RecF pathway recombination. | 0.754 |
| era | ybeY | PFREUD_08870 | PFREUD_08850 | GTP-binding protein; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism. | Hypothetical protein; Single strand-specific metallo-endoribonuclease involved in late-stage 70S ribosome quality control and in maturation of the 3' terminus of the 16S rRNA. | 0.900 |
| phoH | CBL56409.1 | PFREUD_08840 | PFREUD_08830 | Phosphate starvation-inducible protein PhoH-like protein. | Transporter, MFS superfamily protein. | 0.496 |
| phoH | CBL56412.1 | PFREUD_08840 | PFREUD_08860 | Phosphate starvation-inducible protein PhoH-like protein. | Hypothetical secreted protein. | 0.661 |
| phoH | CBL56660.1 | PFREUD_08840 | PFREUD_11380 | Phosphate starvation-inducible protein PhoH-like protein. | Sun, tRNA and rRNA cytosine-C5-methylases; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.575 |
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