STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pduVPropanediol utilization protein PduV; Glycerol metabolism; Belongs to the EutP/PduV family. (141 aa)    
Predicted Functional Partners:
pdU
Propanediol utilization protein PduU; Cobalamin-dependent degradation of ethanolamine.
 
  
 0.962
eutJ
Ethanolamine utilization protein EutJ.
 
  
 0.808
pduA
Propanediol utilization protein PduA; Glycerol metabolism.
 
  
 0.748
pduJ
Propanediol utilization protein PduJ.
 
  
 0.710
pduK
Propanediol utilization protein PduK.
 
  
 0.683
pduO
Propanediol utilization protein PduO; Glycerol metabolism; Belongs to the Cob(I)alamin adenosyltransferase family.
 
   
 0.674
pduN
Propanediol utilization protein PduN; Glycerol metabolism.
 
   
 0.668
pduB
Propanediol utilization protein PduB; Glycerol degradation.
 
   
 0.638
DhaG
Glycerol dehydratase reactivation factor DhaG; Glycerol metabolism.
 
     0.589
CBL57036.1
Two-component system response regulator.
 
   
 0.577
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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