STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL56463.1Von Willebrand factor, type A. (321 aa)    
Predicted Functional Partners:
CBL56461.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
  
 0.986
moxR
ATPases MoxR family.
 
  
 0.953
chlD
ChlD, Mg-chelatase subunit ChlD.
 
    
0.868
CBL56464.1
Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
       0.840
CBL56459.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.679
CBL57041.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.585
CBL57464.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.567
CBL56565.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.512
cof
Predicted hydrolases of the HAD superfamily.
       0.481
CBL56040.1
Nuclease (RecB family).
  
     0.469
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
Server load: low (28%) [HD]