STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL56489.1Hypothetical transmembrane protein. (215 aa)    
Predicted Functional Partners:
CBL57460.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.762
CBL57218.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.759
CBL57922.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.758
CBL57306.1
Hypothetical membrane protein.
  
     0.754
CBL56545.1
Anti-sigma factor.
  
    0.753
CBL57079.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.746
CBL57707.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.738
CBL56704.1
Hypothetical membrane protein.
  
     0.733
CBL56273.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.731
CBL57558.1
Hypothetical membrane protein.
  
     0.730
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
Server load: low (18%) [HD]