Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56503.1 | CBL56504.1 | PFREUD_09780 | PFREUD_09790 | 5.2 Protein of unknown function similar to proteins from other organisms. | PP2Cc, Serine/threonine phosphatases. | 0.571 |
| CBL56503.1 | CBL56715.1 | PFREUD_09780 | PFREUD_11930 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.502 |
| CBL56503.1 | CBL56751.1 | PFREUD_09780 | PFREUD_12310 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 0.576 |
| CBL56503.1 | CBL56788.1 | PFREUD_09780 | PFREUD_12720 | 5.2 Protein of unknown function similar to proteins from other organisms. | Nucleic acid binding, OB-fold, tRNA/helicase-type. | 0.413 |
| CBL56503.1 | CBL57108.1 | PFREUD_09780 | PFREUD_16100 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.400 |
| CBL56503.1 | PFREUD_22550 | PFREUD_09780 | PFREUD_22550 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical protein fragment; Signal peptide ?. | 0.411 |
| CBL56503.1 | merR1 | PFREUD_09780 | PFREUD_12330 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.476 |
| CBL56503.1 | vpr | PFREUD_09780 | PFREUD_01120 | 5.2 Protein of unknown function similar to proteins from other organisms. | Subtilases are a family of serine proteases. | 0.464 |
| CBL56503.1 | whiB1 | PFREUD_09780 | PFREUD_07350 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.482 |
| CBL56503.1 | whiB2 | PFREUD_09780 | PFREUD_10240 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.654 |
| CBL56504.1 | CBL56503.1 | PFREUD_09790 | PFREUD_09780 | PP2Cc, Serine/threonine phosphatases. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.571 |
| CBL56715.1 | CBL56503.1 | PFREUD_11930 | PFREUD_09780 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.502 |
| CBL56715.1 | CBL56788.1 | PFREUD_11930 | PFREUD_12720 | 5.2 Protein of unknown function similar to proteins from other organisms. | Nucleic acid binding, OB-fold, tRNA/helicase-type. | 0.439 |
| CBL56751.1 | CBL56503.1 | PFREUD_12310 | PFREUD_09780 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.576 |
| CBL56751.1 | merR1 | PFREUD_12310 | PFREUD_12330 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.783 |
| CBL56751.1 | whiB1 | PFREUD_12310 | PFREUD_07350 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.834 |
| CBL56751.1 | whiB2 | PFREUD_12310 | PFREUD_10240 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.771 |
| CBL56788.1 | CBL56503.1 | PFREUD_12720 | PFREUD_09780 | Nucleic acid binding, OB-fold, tRNA/helicase-type. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.413 |
| CBL56788.1 | CBL56715.1 | PFREUD_12720 | PFREUD_11930 | Nucleic acid binding, OB-fold, tRNA/helicase-type. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.439 |
| CBL57108.1 | CBL56503.1 | PFREUD_16100 | PFREUD_09780 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.400 |
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