Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56561.1 | CBL56565.1 | PFREUD_10380 | PFREUD_10420 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 6 Protein of unknown function, without similarity to other proteins. | 0.656 |
| CBL56561.1 | atpB | PFREUD_10380 | PFREUD_10430 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.675 |
| CBL56561.1 | atpC | PFREUD_10380 | PFREUD_10500 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.559 |
| CBL56561.1 | hemK | PFREUD_10380 | PFREUD_10370 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.955 |
| CBL56561.1 | prfA | PFREUD_10380 | PFREUD_10360 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Peptide chain release factor 1 (RF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.849 |
| CBL56561.1 | rpmE | PFREUD_10380 | PFREUD_10350 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.615 |
| CBL56561.1 | tagO | PFREUD_10380 | PFREUD_10390 | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Catalyzes the formation of undecaprenyl-PP-N-acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to the peptidoglycan of B.subtilis. UDP-N-acetyl-D-glucosamine + undecaprenyl phosphate = UMP + N-acetyl-alpha-D-glucosaminyldiphospho-undecaprenol. | 0.850 |
| CBL56565.1 | CBL56561.1 | PFREUD_10420 | PFREUD_10380 | 6 Protein of unknown function, without similarity to other proteins. | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.656 |
| CBL56565.1 | atpB | PFREUD_10420 | PFREUD_10430 | 6 Protein of unknown function, without similarity to other proteins. | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 0.882 |
| CBL56565.1 | atpC | PFREUD_10420 | PFREUD_10500 | 6 Protein of unknown function, without similarity to other proteins. | ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.686 |
| CBL56565.1 | hemK | PFREUD_10420 | PFREUD_10370 | 6 Protein of unknown function, without similarity to other proteins. | Methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.644 |
| CBL56565.1 | prfA | PFREUD_10420 | PFREUD_10360 | 6 Protein of unknown function, without similarity to other proteins. | Peptide chain release factor 1 (RF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.644 |
| CBL56565.1 | rpmE | PFREUD_10420 | PFREUD_10350 | 6 Protein of unknown function, without similarity to other proteins. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.476 |
| CBL56565.1 | tagO | PFREUD_10420 | PFREUD_10390 | 6 Protein of unknown function, without similarity to other proteins. | Undecaprenyl-phosphate alpha-N-acetylglucosaminyltransferase; Catalyzes the formation of undecaprenyl-PP-N-acetylglucosamine. Involved in the synthesis of anionic cell-wall polymers as it mediates the initiation of the linkage unit formation that appears to be common to the two types of teichoic acids attached to the peptidoglycan of B.subtilis. UDP-N-acetyl-D-glucosamine + undecaprenyl phosphate = UMP + N-acetyl-alpha-D-glucosaminyldiphospho-undecaprenol. | 0.661 |
| atpB | CBL56561.1 | PFREUD_10430 | PFREUD_10380 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Sua5/YciO/YrdC/YwlC; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. | 0.675 |
| atpB | CBL56565.1 | PFREUD_10430 | PFREUD_10420 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 6 Protein of unknown function, without similarity to other proteins. | 0.882 |
| atpB | atpC | PFREUD_10430 | PFREUD_10500 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | ATP synthase epsilon chain (ATP synthase F1 sector epsilon subunit); Produces ATP from ADP in the presence of a proton gradient across the membrane. | 0.999 |
| atpB | hemK | PFREUD_10430 | PFREUD_10370 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Methylase; Methylates the class 1 translation termination release factors RF1/PrfA and RF2/PrfB on the glutamine residue of the universally conserved GGQ motif; Belongs to the protein N5-glutamine methyltransferase family. PrmC subfamily. | 0.678 |
| atpB | prfA | PFREUD_10430 | PFREUD_10360 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | Peptide chain release factor 1 (RF-1); Peptide chain release factor 1 directs the termination of translation in response to the peptide chain termination codons UAG and UAA. | 0.660 |
| atpB | rpmE | PFREUD_10430 | PFREUD_10350 | ATP synthase A chain (ATPase protein 6) (F1F0-ATPase subunit a); Key component of the proton channel; it plays a direct role in the translocation of protons across the membrane. | 50S ribosomal protein L31; Binds the 23S rRNA. | 0.541 |
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