Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56724.1 | CBL56725.1 | PFREUD_12020 | PFREUD_12030 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 6 Protein of unknown function, without similarity to other proteins. | 0.589 |
| CBL56724.1 | gcp | PFREUD_12020 | PFREUD_06360 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | 0.647 |
| CBL56724.1 | pfp | PFREUD_12020 | PFREUD_12040 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | Pyrophosphate phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Cla [...] | 0.416 |
| CBL56724.1 | sbcC | PFREUD_12020 | PFREUD_04360 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | ATP-dependent dsDNA exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3prime->5prime double strand exonuclease that can open hairpins. It also has a 5prim single-strand endonuclease activity. | 0.431 |
| CBL56724.1 | trmB | PFREUD_12020 | PFREUD_06210 | Sua5_yciO_yrdC; Belongs to the SUA5 family. | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | 0.466 |
| CBL56725.1 | CBL56724.1 | PFREUD_12030 | PFREUD_12020 | 6 Protein of unknown function, without similarity to other proteins. | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.589 |
| CBL56725.1 | pfp | PFREUD_12030 | PFREUD_12040 | 6 Protein of unknown function, without similarity to other proteins. | Pyrophosphate phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Cla [...] | 0.547 |
| gcp | CBL56724.1 | PFREUD_06360 | PFREUD_12020 | Putative O-sialoglycoprotein endopeptidase; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family. | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.647 |
| pfp | CBL56724.1 | PFREUD_12040 | PFREUD_12020 | Pyrophosphate phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Cla [...] | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.416 |
| pfp | CBL56725.1 | PFREUD_12040 | PFREUD_12030 | Pyrophosphate phosphofructokinase; Catalyzes the phosphorylation of D-fructose 6-phosphate, the first committing step of glycolysis. Uses inorganic phosphate (PPi) as phosphoryl donor instead of ATP like common ATP-dependent phosphofructokinases (ATP-PFKs), which renders the reaction reversible, and can thus function both in glycolysis and gluconeogenesis. Consistently, PPi-PFK can replace the enzymes of both the forward (ATP- PFK) and reverse (fructose-bisphosphatase (FBPase)) reactions. Belongs to the phosphofructokinase type A (PFKA) family. PPi-dependent PFK group II subfamily. Cla [...] | 6 Protein of unknown function, without similarity to other proteins. | 0.547 |
| sbcC | CBL56724.1 | PFREUD_04360 | PFREUD_12020 | ATP-dependent dsDNA exonuclease SbcC; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3prime->5prime double strand exonuclease that can open hairpins. It also has a 5prim single-strand endonuclease activity. | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.431 |
| trmB | CBL56724.1 | PFREUD_06210 | PFREUD_12020 | tRNA (guanine-N(7)-)-methyltransferase (tRNA(m7G46)-methyltransferase); Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA. | Sua5_yciO_yrdC; Belongs to the SUA5 family. | 0.466 |