Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55654.1 | CBL57715.1 | PFREUD_01360 | PFREUD_22120 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.529 |
| CBL55654.1 | hrdD1 | PFREUD_01360 | PFREUD_12070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.532 |
| CBL56727.1 | CBL57715.1 | PFREUD_12060 | PFREUD_22120 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.761 |
| CBL56727.1 | dnaG1 | PFREUD_12060 | PFREUD_12080 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 0.548 |
| CBL56727.1 | hrdD1 | PFREUD_12060 | PFREUD_12070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.541 |
| CBL57564.1 | CBL57715.1 | PFREUD_20720 | PFREUD_22120 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical membrane protein. | 0.583 |
| CBL57564.1 | hrdD1 | PFREUD_20720 | PFREUD_12070 | 5.2 Protein of unknown function similar to proteins from other organisms. | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.647 |
| CBL57715.1 | CBL55654.1 | PFREUD_22120 | PFREUD_01360 | Hypothetical membrane protein. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.529 |
| CBL57715.1 | CBL56727.1 | PFREUD_22120 | PFREUD_12060 | Hypothetical membrane protein. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.761 |
| CBL57715.1 | CBL57564.1 | PFREUD_22120 | PFREUD_20720 | Hypothetical membrane protein. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.583 |
| CBL57715.1 | hrdD1 | PFREUD_22120 | PFREUD_12070 | Hypothetical membrane protein. | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.806 |
| dnaG1 | CBL56727.1 | PFREUD_12080 | PFREUD_12060 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.548 |
| dnaG1 | hrdD1 | PFREUD_12080 | PFREUD_12070 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.520 |
| dnaG1 | infB | PFREUD_12080 | PFREUD_14640 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.438 |
| dnaG1 | rpoA | PFREUD_12080 | PFREUD_06070 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.406 |
| dnaG1 | rpoB | PFREUD_12080 | PFREUD_05600 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.727 |
| dnaG1 | rpoC | PFREUD_12080 | PFREUD_05610 | DNA primase; RNA polymerase that catalyzes the synthesis of short RNA molecules used as primers for DNA polymerase during DNA replication. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.791 |
| hrdD1 | CBL55654.1 | PFREUD_12070 | PFREUD_01360 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.532 |
| hrdD1 | CBL56727.1 | PFREUD_12070 | PFREUD_12060 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.541 |
| hrdD1 | CBL57564.1 | PFREUD_12070 | PFREUD_20720 | Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.647 |
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