Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56657.1 | CBL56752.1 | PFREUD_11350 | PFREUD_12320 | 5.2 Protein of unknown function similar to proteins from other organisms. | BFN domain-containing protein; Unnamed protein product. | 0.594 |
| CBL56751.1 | CBL56752.1 | PFREUD_12310 | PFREUD_12320 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | BFN domain-containing protein; Unnamed protein product. | 0.877 |
| CBL56751.1 | CBL56754.1 | PFREUD_12310 | PFREUD_12340 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Forkhead-associated protein; Involved in signal transduction mechanisms. | 0.628 |
| CBL56751.1 | gcvH | PFREUD_12310 | PFREUD_12350 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Glycine cleavage H-protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.441 |
| CBL56751.1 | gcvP | PFREUD_12310 | PFREUD_12300 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Glycine dehydrogenase [decarboxylating] (Glycine decarboxylase) (Glycine cleavage system P-protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.581 |
| CBL56751.1 | merR1 | PFREUD_12310 | PFREUD_12330 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.783 |
| CBL56752.1 | CBL56657.1 | PFREUD_12320 | PFREUD_11350 | BFN domain-containing protein; Unnamed protein product. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.594 |
| CBL56752.1 | CBL56751.1 | PFREUD_12320 | PFREUD_12310 | BFN domain-containing protein; Unnamed protein product. | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 0.877 |
| CBL56752.1 | CBL56754.1 | PFREUD_12320 | PFREUD_12340 | BFN domain-containing protein; Unnamed protein product. | Forkhead-associated protein; Involved in signal transduction mechanisms. | 0.847 |
| CBL56752.1 | CBL56756.1 | PFREUD_12320 | PFREUD_12360 | BFN domain-containing protein; Unnamed protein product. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.650 |
| CBL56752.1 | CBL56758.1 | PFREUD_12320 | PFREUD_12380 | BFN domain-containing protein; Unnamed protein product. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.598 |
| CBL56752.1 | CBL57528.1 | PFREUD_12320 | PFREUD_20350 | BFN domain-containing protein; Unnamed protein product. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.617 |
| CBL56752.1 | gcvH | PFREUD_12320 | PFREUD_12350 | BFN domain-containing protein; Unnamed protein product. | Glycine cleavage H-protein (lipoate-binding); The glycine cleavage system catalyzes the degradation of glycine. The H protein shuttles the methylamine group of glycine from the P protein to the T protein. | 0.573 |
| CBL56752.1 | gcvP | PFREUD_12320 | PFREUD_12300 | BFN domain-containing protein; Unnamed protein product. | Glycine dehydrogenase [decarboxylating] (Glycine decarboxylase) (Glycine cleavage system P-protein); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.559 |
| CBL56752.1 | merR1 | PFREUD_12320 | PFREUD_12330 | BFN domain-containing protein; Unnamed protein product. | Transcriptional regulator, MerR; MerR, which is found in many bacterial species mediates the mercuric-dependent induction of the mercury resistance operon. In the absence of mercury merR represses transcription by binding tightly, as a dimer, to the mer operator region; when mercury is present the dimeric complex binds a single ion and becomes a potent transcriptional activator, while remaining bound to the mer site. | 0.911 |
| CBL56752.1 | metE | PFREUD_12320 | PFREUD_10720 | BFN domain-containing protein; Unnamed protein product. | Methionine synthase, vitamin-B12 independent; 5-Methyltetrahydropteroyltri-L-glutamate + L-Homocysteine <=> Tetrahydropteroyltri-L-glutamate + L-Methionine. | 0.589 |
| CBL56754.1 | CBL56751.1 | PFREUD_12340 | PFREUD_12310 | Forkhead-associated protein; Involved in signal transduction mechanisms. | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 0.628 |
| CBL56754.1 | CBL56752.1 | PFREUD_12340 | PFREUD_12320 | Forkhead-associated protein; Involved in signal transduction mechanisms. | BFN domain-containing protein; Unnamed protein product. | 0.847 |
| CBL56754.1 | CBL56756.1 | PFREUD_12340 | PFREUD_12360 | Forkhead-associated protein; Involved in signal transduction mechanisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.486 |
| CBL56754.1 | CBL56758.1 | PFREUD_12340 | PFREUD_12380 | Forkhead-associated protein; Involved in signal transduction mechanisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.445 |
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