STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yghURX + Glutathione <=> HX + R-S-Glutathione. (86 aa)    
Predicted Functional Partners:
CBL56784.1
SAM-dependent methyltransferase related to tRNA (tRNA (uracil-5-)-methyltransferase); S-Adenosyl-L-methionine + tRNA <=> S-Adenosyl-L-homocysteine + tRNA containing thymine; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family.
       0.798
ydaO
Amino acid permease; Cellular component: membrane, amino acid transporter activity.
       0.798
CBL56942.1
Hypothetical membrane protein.
  
     0.573
CBL56395.1
Membrane protein.
  
     0.568
TrkA
Trk system potassium uptake protein TrkA.
       0.521
CBL57231.1
NUDIX hydrolase; Belongs to the Nudix hydrolase family.
  
     0.508
trkA
Trk system potassium uptake protein TrkA (K(+)-uptake protein TrkA).
       0.500
CBL56475.1
Putative ABC transporter ATP-binding protein.
  
     0.461
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.