Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56146.1 | CBL56888.1 | PFREUD_06160 | PFREUD_13710 | ABC transporter-associated permease. | ABC-type transporter, ATPase component. | 0.641 |
| CBL56146.1 | CBL56889.1 | PFREUD_06160 | PFREUD_13720 | ABC transporter-associated permease. | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | 0.921 |
| CBL56146.1 | cbiO1 | PFREUD_06160 | PFREUD_04560 | ABC transporter-associated permease. | Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. | 0.641 |
| CBL56146.1 | cbiO3 | PFREUD_06160 | PFREUD_20190 | ABC transporter-associated permease. | ABC transporter, ATP-binding protein; Locus ABC transporter PF #2140, 2141 et 2475. | 0.641 |
| CBL56146.1 | cbiQ1 | PFREUD_06160 | PFREUD_20200 | ABC transporter-associated permease. | ABC-type transporter, permease components (ABC-type cobalt transport system, permease component CbiQ). | 0.900 |
| CBL56146.1 | pf2694 | PFREUD_06160 | PFREUD_06140 | ABC transporter-associated permease. | ABC-type transporter, permease components. | 0.989 |
| CBL56886.1 | CBL56888.1 | PFREUD_13690 | PFREUD_13710 | Cobalt permease. | ABC-type transporter, ATPase component. | 0.998 |
| CBL56886.1 | CBL56889.1 | PFREUD_13690 | PFREUD_13720 | Cobalt permease. | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | 0.995 |
| CBL56886.1 | cbiO1 | PFREUD_13690 | PFREUD_04560 | Cobalt permease. | Cobalt import ATP-binding protein CbiO; Part of an ABC transporter complex. Responsible for energy coupling to the transport system. | 0.641 |
| CBL56886.1 | cbiO3 | PFREUD_13690 | PFREUD_20190 | Cobalt permease. | ABC transporter, ATP-binding protein; Locus ABC transporter PF #2140, 2141 et 2475. | 0.685 |
| CBL56886.1 | pf2694 | PFREUD_13690 | PFREUD_06140 | Cobalt permease. | ABC-type transporter, permease components. | 0.629 |
| CBL56888.1 | CBL56146.1 | PFREUD_13710 | PFREUD_06160 | ABC-type transporter, ATPase component. | ABC transporter-associated permease. | 0.641 |
| CBL56888.1 | CBL56886.1 | PFREUD_13710 | PFREUD_13690 | ABC-type transporter, ATPase component. | Cobalt permease. | 0.998 |
| CBL56888.1 | CBL56889.1 | PFREUD_13710 | PFREUD_13720 | ABC-type transporter, ATPase component. | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | 0.995 |
| CBL56888.1 | cbiQ1 | PFREUD_13710 | PFREUD_20200 | ABC-type transporter, ATPase component. | ABC-type transporter, permease components (ABC-type cobalt transport system, permease component CbiQ). | 0.656 |
| CBL56888.1 | cbiQ2 | PFREUD_13710 | PFREUD_04570 | ABC-type transporter, ATPase component. | Cobalt transport protein CbiQ. | 0.641 |
| CBL56889.1 | CBL56146.1 | PFREUD_13720 | PFREUD_06160 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | ABC transporter-associated permease. | 0.921 |
| CBL56889.1 | CBL56886.1 | PFREUD_13720 | PFREUD_13690 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | Cobalt permease. | 0.995 |
| CBL56889.1 | CBL56888.1 | PFREUD_13720 | PFREUD_13710 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | ABC-type transporter, ATPase component. | 0.995 |
| CBL56889.1 | birA | PFREUD_13720 | PFREUD_07250 | BioY family protein. Membrane protein; BioY family. A number of bacterial genes are involved in bioconversion of pimelate into dethiobiotin. BioY is involved in this process, however the exact function of the protein is unknown. | BirA, Biotin-(acetyl-CoA carboxylase) ligase; Biotin is covalently attached at the active site of certain enzymes that transfer carbon dioxide from bicarbonate to organic acids to form cellular metabolites. ATP + Biotin + Apo-[acetyl-CoA:carbon-dioxide ligase (ADP-forming)] <=> AMP + Pyrophosphate + [Acetyl-CoA:carbon-dioxide ligase (ADP-forming)]. | 0.566 |
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