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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL56909.16 Protein of unknown function, without similarity to other proteins. (160 aa)    
Predicted Functional Partners:
pf774
Putative carboxylic ester hydrolase.
  
     0.764
pf2416
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.753
pf1420
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.733
CBL57034.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.728
CBL56459.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.721
CBL56580.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.721
CBL57707.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.718
CBL57103.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.714
CBL56265.1
Hypothetical membrane protein.
  
     0.713
CBL57102.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.713
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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