Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56751.1 | CBL56925.1 | PFREUD_12310 | PFREUD_14260 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.711 |
| CBL56751.1 | CBL57009.1 | PFREUD_12310 | PFREUD_15100 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.631 |
| CBL56751.1 | rbpA | PFREUD_12310 | PFREUD_10940 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.751 |
| CBL56751.1 | rpoZ | PFREUD_12310 | PFREUD_11420 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.766 |
| CBL56751.1 | whiB1 | PFREUD_12310 | PFREUD_07350 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.834 |
| CBL56751.1 | whiB2 | PFREUD_12310 | PFREUD_10240 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.771 |
| CBL56751.1 | whiB3 | PFREUD_12310 | PFREUD_19410 | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | Transcription factor WhiB. | 0.698 |
| CBL56925.1 | CBL56751.1 | PFREUD_14260 | PFREUD_12310 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 0.711 |
| CBL56925.1 | CBL57009.1 | PFREUD_14260 | PFREUD_15100 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 0.661 |
| CBL56925.1 | lepB | PFREUD_14260 | PFREUD_14280 | 5.2 Protein of unknown function similar to proteins from other organisms. | Signal peptidase I; Cleavage of hydrophobic, N-terminal signal or leader sequences from secreted and periplasmic proteins; Belongs to the peptidase S26 family. | 0.837 |
| CBL56925.1 | rbpA | PFREUD_14260 | PFREUD_10940 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.682 |
| CBL56925.1 | rnhB | PFREUD_14260 | PFREUD_14270 | 5.2 Protein of unknown function similar to proteins from other organisms. | Ribonuclease HII; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.852 |
| CBL56925.1 | rplS | PFREUD_14260 | PFREUD_14290 | 5.2 Protein of unknown function similar to proteins from other organisms. | 50S ribosomal protein L19; This protein is located at the 30S-50S ribosomal subunit interface and may play a role in the structure and function of the aminoacyl-tRNA binding site. | 0.674 |
| CBL56925.1 | rpoZ | PFREUD_14260 | PFREUD_11420 | 5.2 Protein of unknown function similar to proteins from other organisms. | DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits. | 0.652 |
| CBL56925.1 | whiB1 | PFREUD_14260 | PFREUD_07350 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.761 |
| CBL56925.1 | whiB2 | PFREUD_14260 | PFREUD_10240 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA. | 0.770 |
| CBL56925.1 | whiB3 | PFREUD_14260 | PFREUD_19410 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcription factor WhiB. | 0.671 |
| CBL57009.1 | CBL56751.1 | PFREUD_15100 | PFREUD_12310 | Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Transcriptional regulator, MerR; The MERR family transcription regulators have been shown to mediate responses to stress including exposure to heavy metals, drugs, or oxygen radicals in eubacterial and some archaeal species. They regulate transcription of multidrug/metal ion transporters genes and oxidative stress regulons by reconfiguring the spacer between the -35 and -10 promoter elements. | 0.631 |
| CBL57009.1 | CBL56925.1 | PFREUD_15100 | PFREUD_14260 | Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.661 |
| CBL57009.1 | rbpA | PFREUD_15100 | PFREUD_10940 | Hypothetical protein; Involved in protein export. Participates in an early event of protein translocation; Belongs to the SecG family. | Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters. | 0.657 |
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