spoU2 protein (Propionibacterium freudenreichii)

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spoU2

RRNA methylase family protein (TRNA/rRNA methyltransferase); Belongs to the RNA methyltransferase trmH family. RNA processing. (269 aa)

Predicted Functional Partners:

rsfS

0.582

rplQ

0.580

CBL56982.1

0.576

rplU

0.575

rplO

0.572

acpP

0.566

rluA

0.565

rplK

0.561

rplM

0.560

rplX

0.559

Your Current Organism:

Propionibacterium freudenreichii

NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
CBL56982.1	spoU2	PFREUD_14830	PFREUD_14820	Transporter, sodium/bile acid symporter family.	RRNA methylase family protein (TRNA/rRNA methyltransferase); Belongs to the RNA methyltransferase trmH family. RNA processing.	0.576
acpP	rluA	PFREUD_09420	PFREUD_15400	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	0.849
acpP	rplK	PFREUD_09420	PFREUD_05530	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.922
acpP	rplM	PFREUD_09420	PFREUD_06240	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.951
acpP	rplO	PFREUD_09420	PFREUD_05900	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.896
acpP	rplQ	PFREUD_09420	PFREUD_06080	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L17.	0.946
acpP	rplU	PFREUD_09420	PFREUD_08450	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.972
acpP	rplX	PFREUD_09420	PFREUD_05820	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.911
acpP	rsfS	PFREUD_09420	PFREUD_08540	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	Conserved protein, DUF143 domain; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.888
acpP	spoU2	PFREUD_09420	PFREUD_14820	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	RRNA methylase family protein (TRNA/rRNA methyltransferase); Belongs to the RNA methyltransferase trmH family. RNA processing.	0.566
rluA	acpP	PFREUD_15400	PFREUD_09420	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.849
rluA	rplK	PFREUD_15400	PFREUD_05530	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	0.872
rluA	rplM	PFREUD_15400	PFREUD_06240	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L13; This protein is one of the early assembly proteins of the 50S ribosomal subunit, although it is not seen to bind rRNA by itself. It is important during the early stages of 50S assembly.	0.898
rluA	rplO	PFREUD_15400	PFREUD_05900	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L15; Binds to the 23S rRNA; Belongs to the universal ribosomal protein uL15 family.	0.889
rluA	rplQ	PFREUD_15400	PFREUD_06080	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L17.	0.899
rluA	rplU	PFREUD_15400	PFREUD_08450	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L21; This protein binds to 23S rRNA in the presence of protein L20; Belongs to the bacterial ribosomal protein bL21 family.	0.903
rluA	rplX	PFREUD_15400	PFREUD_05820	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	50S ribosomal protein L24; One of the proteins that surrounds the polypeptide exit tunnel on the outside of the subunit.	0.867
rluA	rsfS	PFREUD_15400	PFREUD_08540	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	Conserved protein, DUF143 domain; Functions as a ribosomal silencing factor. Interacts with ribosomal protein L14 (rplN), blocking formation of intersubunit bridge B8. Prevents association of the 30S and 50S ribosomal subunits and the formation of functional ribosomes, thus repressing translation.	0.896
rluA	spoU2	PFREUD_15400	PFREUD_14820	Pseudouridylate synthase, Uncharacterized RNA pseudouridine synthase; Responsible for synthesis of pseudouridine from uracil. Belongs to the pseudouridine synthase RluA family.	RRNA methylase family protein (TRNA/rRNA methyltransferase); Belongs to the RNA methyltransferase trmH family. RNA processing.	0.565
rplK	acpP	PFREUD_05530	PFREUD_09420	50S ribosomal protein L11; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors.	Acyl carrier protein (ACP); Carrier of the growing fatty acid chain in fatty acid biosynthesis.	0.922

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