Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56991.1 | CBL56995.1 | PFREUD_14920 | PFREUD_14960 | 5.2 Protein of unknown function similar to proteins from other organisms. | Dioxygenase. | 0.871 |
| CBL56991.1 | arsR4 | PFREUD_14920 | PFREUD_14990 | 5.2 Protein of unknown function similar to proteins from other organisms. | Transcriptional regulator, ArsR family. | 0.837 |
| CBL56991.1 | nifU1 | PFREUD_14920 | PFREUD_14930 | 5.2 Protein of unknown function similar to proteins from other organisms. | Nitrogen-fixing NifU-like; The nif genes are responsible for nitrogen fixation. However this domain is found in bacteria that do not fix nitrogen, so it may have a broader significance in the cell than nitrogen fixation. | 0.995 |
| CBL56991.1 | sufB | PFREUD_14920 | PFREUD_14980 | 5.2 Protein of unknown function similar to proteins from other organisms. | FeS assembly protein SufB. | 0.954 |
| CBL56991.1 | sufC | PFREUD_14920 | PFREUD_14950 | 5.2 Protein of unknown function similar to proteins from other organisms. | ABC-type transport system involved in Fe-S cluster assembly, ATPase component, SufC; The SUF system of Escherichia coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD. | 0.962 |
| CBL56991.1 | sufD | PFREUD_14920 | PFREUD_14970 | 5.2 Protein of unknown function similar to proteins from other organisms. | FeS assembly protein SufD. | 0.947 |
| CBL56991.1 | sufS | PFREUD_14920 | PFREUD_14940 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.952 |
| CBL56995.1 | CBL56991.1 | PFREUD_14960 | PFREUD_14920 | Dioxygenase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.871 |
| CBL56995.1 | arsR4 | PFREUD_14960 | PFREUD_14990 | Dioxygenase. | Transcriptional regulator, ArsR family. | 0.836 |
| CBL56995.1 | cysG/cbiX | PFREUD_14960 | PFREUD_07710 | Dioxygenase. | CysG/CbiX; Cobalt fixation on precorrin 2. | 0.757 |
| CBL56995.1 | gltB | PFREUD_14960 | PFREUD_11860 | Dioxygenase. | Glutamate synthase large subunit (Ferredoxin); 2 L-Glutamate + 2 Oxidized ferredoxin <=> L-Glutamine + 2-Oxoglutarate + 2 Reduced ferredoxin. | 0.753 |
| CBL56995.1 | hemD | PFREUD_14960 | PFREUD_20070 | Dioxygenase. | Uroporphyrinogen-III synthase HemD; Catalyzes cyclization of the linear tetrapyrrole, hydroxymethylbilane, to the macrocyclic uroporphyrinogen III. | 0.813 |
| CBL56995.1 | nifU1 | PFREUD_14960 | PFREUD_14930 | Dioxygenase. | Nitrogen-fixing NifU-like; The nif genes are responsible for nitrogen fixation. However this domain is found in bacteria that do not fix nitrogen, so it may have a broader significance in the cell than nitrogen fixation. | 0.837 |
| CBL56995.1 | sufB | PFREUD_14960 | PFREUD_14980 | Dioxygenase. | FeS assembly protein SufB. | 0.862 |
| CBL56995.1 | sufC | PFREUD_14960 | PFREUD_14950 | Dioxygenase. | ABC-type transport system involved in Fe-S cluster assembly, ATPase component, SufC; The SUF system of Escherichia coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD. | 0.837 |
| CBL56995.1 | sufD | PFREUD_14960 | PFREUD_14970 | Dioxygenase. | FeS assembly protein SufD. | 0.866 |
| CBL56995.1 | sufS | PFREUD_14960 | PFREUD_14940 | Dioxygenase. | Cysteine desulphurases, SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. | 0.837 |
| arsR4 | CBL56991.1 | PFREUD_14990 | PFREUD_14920 | Transcriptional regulator, ArsR family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.837 |
| arsR4 | CBL56995.1 | PFREUD_14990 | PFREUD_14960 | Transcriptional regulator, ArsR family. | Dioxygenase. | 0.836 |
| arsR4 | nifU1 | PFREUD_14990 | PFREUD_14930 | Transcriptional regulator, ArsR family. | Nitrogen-fixing NifU-like; The nif genes are responsible for nitrogen fixation. However this domain is found in bacteria that do not fix nitrogen, so it may have a broader significance in the cell than nitrogen fixation. | 0.879 |
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