STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57024.1Acetyltransferase. (178 aa)    
Predicted Functional Partners:
CBL57534.1
Hypothetical membrane protein.
  
     0.730
CBL56339.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.676
CBL56404.1
Metallophosphoesterase.
  
     0.673
CBL56322.1
5.2 Protein of unknown function similar to proteins from other organisms.
 
     0.662
CBL55586.1
Peptidase_E_like; In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly.
  
     0.652
CBL57621.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.648
CBL57785.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
 
   0.637
CBL56010.1
6 Protein of unknown function, without similarity to other proteins.
  
    0.628
CBL55654.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.557
CBL57926.1
ABC transporter, substrate-binding protein.
  
     0.524
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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