Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL56464.1 | CBL57042.1 | PFREUD_09380 | PFREUD_15440 | Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.627 |
| CBL56464.1 | CBL57044.1 | PFREUD_09380 | PFREUD_15460 | Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.814 |
| CBL56464.1 | sepF | PFREUD_09380 | PFREUD_15450 | Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.823 |
| CBL57042.1 | CBL56464.1 | PFREUD_15440 | PFREUD_09380 | 5.2 Protein of unknown function similar to proteins from other organisms. | Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.627 |
| CBL57042.1 | CBL57044.1 | PFREUD_15440 | PFREUD_15460 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.611 |
| CBL57042.1 | ftsQ | PFREUD_15440 | PFREUD_15480 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsQ; Essential cell division protein. | 0.437 |
| CBL57042.1 | ftsW1 | PFREUD_15440 | PFREUD_15510 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsW; Belongs to the SEDS family. | 0.437 |
| CBL57042.1 | ftsZ | PFREUD_15440 | PFREUD_15470 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.821 |
| CBL57042.1 | murC | PFREUD_15440 | PFREUD_15490 | 5.2 Protein of unknown function similar to proteins from other organisms. | UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase); Cell wall formation; Belongs to the MurCDEF family. | 0.437 |
| CBL57042.1 | murD | PFREUD_15440 | PFREUD_15520 | 5.2 Protein of unknown function similar to proteins from other organisms. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.468 |
| CBL57042.1 | murG | PFREUD_15440 | PFREUD_15500 | 5.2 Protein of unknown function similar to proteins from other organisms. | Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase; Cell wall formation. Catalyzes the transfer of a GlcNAc subunit on undecaprenyl-pyrophosphoryl-MurNAc-pentapeptide (lipid intermediate I) to form undecaprenyl-pyrophosphoryl-MurNAc- (pentapeptide)GlcNAc (lipid intermediate II); Belongs to the glycosyltransferase 28 family. MurG subfamily. | 0.451 |
| CBL57042.1 | sepF | PFREUD_15440 | PFREUD_15450 | 5.2 Protein of unknown function similar to proteins from other organisms. | Hypothetical protein; Cell division protein that is part of the divisome complex and is recruited early to the Z-ring. Probably stimulates Z-ring formation, perhaps through the cross-linking of FtsZ protofilaments. Its function overlaps with FtsA. | 0.969 |
| CBL57044.1 | CBL56464.1 | PFREUD_15460 | PFREUD_09380 | 5.2 Protein of unknown function similar to proteins from other organisms. | Alanine racemase; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family. | 0.814 |
| CBL57044.1 | CBL57042.1 | PFREUD_15460 | PFREUD_15440 | 5.2 Protein of unknown function similar to proteins from other organisms. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.611 |
| CBL57044.1 | ftsI | PFREUD_15460 | PFREUD_15560 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsI (penicillin-binding protein 2) (Peptidoglycan glycosyltransferase); Transpeptidase activity involved in the biosynthesis of septal peptidoglycan. | 0.567 |
| CBL57044.1 | ftsQ | PFREUD_15460 | PFREUD_15480 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsQ; Essential cell division protein. | 0.549 |
| CBL57044.1 | ftsW1 | PFREUD_15460 | PFREUD_15510 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsW; Belongs to the SEDS family. | 0.756 |
| CBL57044.1 | ftsZ | PFREUD_15460 | PFREUD_15470 | 5.2 Protein of unknown function similar to proteins from other organisms. | Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity. | 0.860 |
| CBL57044.1 | murC | PFREUD_15460 | PFREUD_15490 | 5.2 Protein of unknown function similar to proteins from other organisms. | UDP-N-acetylmuramate--L-alanine ligase (UDP-N-acetylmuramoyl-L-alanine synthetase); Cell wall formation; Belongs to the MurCDEF family. | 0.632 |
| CBL57044.1 | murD | PFREUD_15460 | PFREUD_15520 | 5.2 Protein of unknown function similar to proteins from other organisms. | UDP-N-acetylmuramoylalanine--D-glutamate ligase; Cell wall formation. Catalyzes the addition of glutamate to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanine (UMA). Belongs to the MurCDEF family. | 0.636 |
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