STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CBL57086.15.2 Protein of unknown function similar to proteins from other organisms. (96 aa)    
Predicted Functional Partners:
pspA
Phage shock protein A; Repressor of p54 sigma factor. t has been shown that PspA directly and specifically acts upon and binds to the AAA(+) domain of the PspF transcription activator.
 
     0.965
CBL57085.1
6 Protein of unknown function, without similarity to other proteins.
       0.807
CBL57088.1
6 Protein of unknown function, without similarity to other proteins.
 
     0.724
CBL56489.1
Hypothetical transmembrane protein.
  
     0.691
CBL55650.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.665
otsB
Trehalose-phosphatase (Trehalose 6-phosphate phosphatase); Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
  
     0.642
CBL57449.1
Forkhead-associated protein.
  
     0.598
CBL57464.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.594
CBL56273.1
5.2 Protein of unknown function similar to proteins from other organisms.
  
     0.580
CBL56909.1
6 Protein of unknown function, without similarity to other proteins.
  
     0.576
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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