Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| CBL55920.1 | CBL57140.1 | PFREUD_03870 | PFREUD_16400 | Oxidoreductase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.511 |
| CBL55920.1 | rmlB | PFREUD_03870 | PFREUD_00550 | Oxidoreductase. | dTDP-glucose <=> dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O / dTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.467 |
| CBL57140.1 | CBL55920.1 | PFREUD_16400 | PFREUD_03870 | 5.2 Protein of unknown function similar to proteins from other organisms. | Oxidoreductase. | 0.511 |
| CBL57140.1 | CBL57834.1 | PFREUD_16400 | PFREUD_23200 | 5.2 Protein of unknown function similar to proteins from other organisms. | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | 0.511 |
| CBL57140.1 | cpsA2 | PFREUD_16400 | PFREUD_16390 | 5.2 Protein of unknown function similar to proteins from other organisms. | Carboxypeptidase; J. Bacteriol. 177:5561-5566(1995). | 0.564 |
| CBL57140.1 | fmt | PFREUD_16400 | PFREUD_11390 | 5.2 Protein of unknown function similar to proteins from other organisms. | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 0.507 |
| CBL57140.1 | gtfB | PFREUD_16400 | PFREUD_00610 | 5.2 Protein of unknown function similar to proteins from other organisms. | Glycosyltransferase. | 0.529 |
| CBL57140.1 | iol | PFREUD_16400 | PFREUD_00290 | 5.2 Protein of unknown function similar to proteins from other organisms. | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | 0.511 |
| CBL57140.1 | iolG1 | PFREUD_16400 | PFREUD_19030 | 5.2 Protein of unknown function similar to proteins from other organisms. | iolG1 (Myo-inositol catabolism IolG1 protein) (myo-inositol 2-dehydrogenase); Carbohydrate degradation, myo-inositol degradation to acetyl-CoA. | 0.511 |
| CBL57140.1 | rmlA | PFREUD_16400 | PFREUD_00470 | 5.2 Protein of unknown function similar to proteins from other organisms. | Glucose-1-phosphate thymidylyltransferase; Catalyzes the formation of dTDP-glucose, from dTTP and glucose 1-phosphate, as well as its pyrophosphorolysis. Belongs to the glucose-1-phosphate thymidylyltransferase family. | 0.663 |
| CBL57140.1 | rmlB | PFREUD_16400 | PFREUD_00550 | 5.2 Protein of unknown function similar to proteins from other organisms. | dTDP-glucose <=> dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O / dTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.802 |
| CBL57140.1 | rmlC | PFREUD_16400 | PFREUD_00540 | 5.2 Protein of unknown function similar to proteins from other organisms. | dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.816 |
| CBL57834.1 | CBL57140.1 | PFREUD_23200 | PFREUD_16400 | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.511 |
| CBL57834.1 | rmlB | PFREUD_23200 | PFREUD_00550 | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | dTDP-glucose <=> dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O / dTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.467 |
| cpsA2 | CBL57140.1 | PFREUD_16390 | PFREUD_16400 | Carboxypeptidase; J. Bacteriol. 177:5561-5566(1995). | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.564 |
| fmt | CBL57140.1 | PFREUD_11390 | PFREUD_16400 | Methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.507 |
| gtfB | CBL57140.1 | PFREUD_00610 | PFREUD_16400 | Glycosyltransferase. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.529 |
| gtfB | rmlC | PFREUD_00610 | PFREUD_00540 | Glycosyltransferase. | dTDP-4-dehydrorhamnose reductase / dTDP-4-dehydrorhamnose 3,5-epimerase; Catalyzes the reduction of dTDP-6-deoxy-L-lyxo-4-hexulose to yield dTDP-L-rhamnose. | 0.742 |
| iol | CBL57140.1 | PFREUD_00290 | PFREUD_16400 | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | 5.2 Protein of unknown function similar to proteins from other organisms. | 0.511 |
| iol | rmlB | PFREUD_00290 | PFREUD_00550 | myo-Inositol + NAD+ <=> 2,4,6/3,5-Pentahydroxycyclohexanone + NADH + H+. | dTDP-glucose <=> dTDP-4-dehydro-6-deoxy-alpha-D-glucose + H2O / dTDP-glucose <=> 4,6-Dideoxy-4-oxo-dTDP-D-glucose + H2O; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily. | 0.467 |
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