STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glxK/garKGlycerate kinase GlxK/GarK; ATP + D-Glycerate <=> ADP + 3-Phospho-D-glycerate; Belongs to the glycerate kinase type-1 family. (372 aa)    
Predicted Functional Partners:
CBL57085.1
6 Protein of unknown function, without similarity to other proteins.
  
  
  0.932
gya
Glycolate + NAD+ = glyoxylate + NADH. _ Glycolate + NAD+ <=> Glyoxylate + NADH + H+; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
 0.909
aldB
(S)-lactaldehyde + NAD(+) + H(2)O <=> (S)-lactate + NADH; Belongs to the aldehyde dehydrogenase family.
   
 
  0.901
gpm2
Phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
     
  0.900
gpm1
Phosphoglycerate mutase/fructose-2,6-bisphosphatase.
     
  0.900
mesJ
CMP/dCMP deaminase, zinc-binding; Catalyzes the deamination of adenosine to inosine at the wobble position 34 of tRNA(Arg2); Belongs to the cytidine and deoxycytidylate deaminase family.
 
 
    0.621
gntP
Gluconate transporter (transmembrane).
 
  
 0.502
gnuT
Gluconate permease (transmembrane); SignalP : Signal peptide probability: 0.976 Max cleavage site probability: 0.772 between pos. 39 and 40.
 
  
 0.491
Your Current Organism:
Propionibacterium freudenreichii
NCBI taxonomy Id: 754252
Other names: P. freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii ATCC 9614, Propionibacterium freudenreichii subsp. shermanii CIP 103027, Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii str. CIRM-BIA1, Propionibacterium freudenreichii subsp. shermanii strain CIRM-BIA1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.